期刊
GENOME RESEARCH
卷 28, 期 9, 页码 1395-1404出版社
COLD SPRING HARBOR LAB PRESS, PUBLICATIONS DEPT
DOI: 10.1101/gr.232397.117
关键词
-
资金
- Wellcome Trust [202792/Z/16/Z]
- BacGenTrack ([FCT/Scientific and Technological Research Council of Turkey [Turkiye Bilimsel ve Teknolojik Ara srrma Kurumu, Tubitak]) [TUBITAK/0004/2014]
- BBSRC [BB/L020319/1] Funding Source: UKRI
Current methods struggle to reconstruct and visualize the genomic relationships of large numbers of bacterial genomes. GrapeTree facilitates the analyses of large numbers of allelic profiles by a static GrapeTree Layout algorithm that supports interactive visualizations of large trees within a web browser window. GrapeTree also implements a novel minimum spanning tree algorithm (MSTree V2) to reconstruct genetic relationships despite high levels of missing data. GrapeTree is a stand-alone package for investigating phylogenetic trees plus associated metadata and is also integrated into EnteroBase to facilitate cutting edge navigation of genomic relationships among bacterial pathogens.
作者
我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。
推荐
暂无数据