4.7 Article

Genome sequencing defines phylogeny and spread of methicillin-resistant Staphylococcus aureus in a high transmission setting

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemical Research Methods

Within-Host Bacterial Diversity Hinders Accurate Reconstruction of Transmission Networks from Genomic Distance Data

Colin J. Worby et al.

PLOS COMPUTATIONAL BIOLOGY (2014)

Article Medicine, General & Internal

A Culture-Independent Sequence-Based Metagenomics Approach to the Investigation of an Outbreak of Shiga-Toxigenic Escherichia coli O104:H4

Nicholas J. Loman et al.

JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION (2013)

Article Multidisciplinary Sciences

Genomic variation landscape of the human gut microbiome

Siegfried Schloissnig et al.

NATURE (2013)

Article Multidisciplinary Sciences

MRSA in Africa: Filling the Global Map of Antimicrobial Resistance

Matthew E. Falagas et al.

PLOS ONE (2013)

Article Biochemistry & Molecular Biology

MRSA epidemic linked to a quickly spreading colonization and virulence determinant

Min Li et al.

NATURE MEDICINE (2012)

Article Medicine, General & Internal

Rapid Whole-Genome Sequencing for Investigation of a Neonatal MRSA Outbreak

Claudio U. Köser et al.

NEW ENGLAND JOURNAL OF MEDICINE (2012)

Article Cell Biology

Tracking a Hospital Outbreak of Carbapenem-Resistant Klebsiella pneumoniae with Whole-Genome Sequencing

Evan S. Snitkin et al.

SCIENCE TRANSLATIONAL MEDICINE (2012)

Article Biochemistry & Molecular Biology

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

Koichiro Tamura et al.

MOLECULAR BIOLOGY AND EVOLUTION (2011)

Review Virology

Quasispecies as a matter of fact: Viruses and beyond

Samuel Ojosnegros et al.

VIRUS RESEARCH (2011)

Article Infectious Diseases

Decline of EMRSA-16 amongst methicillin-resistant Staphylococcus aureus causing bacteraemias in the UK between 2001 and 2007

Matthew J. Ellington et al.

JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2010)

Article Multidisciplinary Sciences

Evolution of MRSA During Hospital Transmission and Intercontinental Spread

Simon R. Harris et al.

SCIENCE (2010)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Review Infectious Diseases

Staphylococcus aureus disease and drug resistance in resource-limited countries in south and east Asia

Emma K. Nickerson et al.

LANCET INFECTIOUS DISEASES (2009)

Article Biochemistry & Molecular Biology

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

Daniel R. Zerbino et al.

GENOME RESEARCH (2008)

Article Biochemical Research Methods

RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

Alexandros Stamatakis

BIOINFORMATICS (2006)

Article Biology

Comparisons of dN/dS are time dependent for closely related bacterial genomes

EPC Rocha et al.

JOURNAL OF THEORETICAL BIOLOGY (2006)

Article Biochemical Research Methods

ACT: the Artemis comparison tool

TJ Carver et al.

BIOINFORMATICS (2005)

Article Multidisciplinary Sciences

The evolutionary history of methicillin-resistant Staphylococcus aureus (MRSA)

MC Enright et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)