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Marco Punta et al.
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Qingzong Tseng et al.
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Graham L. Cromar et al.
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Aniket V. Gore et al.
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Christian M. Zmasek et al.
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Xuejian Xiong et al.
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Vincent van Hoef et al.
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Devon J. Mohamed et al.
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Liping Ren et al.
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Cheryl R. Hann et al.
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WordCloud: a Cytoscape plugin to create a visual semantic summary of networks
Layla Oesper et al.
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Hub Promiscuity in Protein-Protein Interaction Networks
Ashwini Patil et al.
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Suat Oezbek et al.
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Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation
Daniele Merico et al.
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Domain distribution and intrinsic disorder in hubs in the human protein-protein interaction network
Ashwini Patil et al.
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Marija Buljan et al.
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How do proteins gain new domains?
Joseph A. Marsh et al.
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Protein domain organisation: adding order
Sarah K. Kummerfeld et al.
BMC BIOINFORMATICS (2009)
Characterization of the acute inflammatory response in the hybrid tambacu (Piaractus mesopotamicus male x Colossoma macropomum female) (Osteichthyes)
M. L. Martins et al.
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Malay Kumar Basu et al.
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Julie Huxley-Jones et al.
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Sarah Hunter et al.
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Richard O. Hynes
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Evolution of protein domain promiscuity in eukaryotes
Malay Kumar Basu et al.
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The cranial endoskeleton of Tiktaalik roseae
Jason P. Downs et al.
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Nicole King et al.
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Per E. Ahlberg et al.
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InParanoid 6: eukaryotic ortholog clusters with inparalogs
Ann-Charlotte Berglund et al.
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Diana Ekman et al.
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UniRef: comprehensive and non-redundant UniProt reference clusters
Baris E. Suzek et al.
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Feng Chen et al.
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Philip M. Kim et al.
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Expansion of protein domain repeats
Asa K. Bjorklund et al.
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Philip Conrad James Donoghue et al.
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Patrick McKenzie et al.
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D Durand et al.
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Silencing of the hydra serine protease inhibitor Kazal1 gene mimics the human SPINK1 pancreatic phenotype
S Chera et al.
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J Huxley-Jones et al.
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R Ewan et al.
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Integrin evolution: Insights from ascidian and teleost fish genomes
M Huhtala et al.
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The relationship between domain duplication and recombination
C Vogel et al.
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Supra-domains: Evolutionary units larger than single protein domains
C Vogel et al.
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Evidence for dynamically organized modularity in the yeast protein-protein interaction network
JDJ Han et al.
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Invertebrate data predict an early emergence of vertebrate fibrillar collagen clades and an anti-incest model
A Aouacheria et al.
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Open source clustering software
MJL de Hoon et al.
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LD Quarles
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Dual functional roles of dentin matrix protein 1 -: Implications in biomineralization and gene transcription by activation of intracellular Ca2+ store
K Narayanan et al.
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Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
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Origin and early evolution of vertebrate skeletonization
PCJ Donoghue et al.
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Swaps in protein sequences
A Fliess et al.
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An efficient algorithm for large-scale detection of protein families
AJ Enright et al.
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GA Di Lullo et al.
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M Bashton et al.
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Identification and characterization of ameloblastin gene in a reptile
S Shintani et al.
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E Hohenester et al.
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Naturally occurring circular permutations in proteins
S Uliel et al.
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Domain combinations in archaeal, eubacterial and eukaryotic proteomes
G Apic et al.
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Evolution of function in protein superfamilies, from a structural perspective
AE Todd et al.
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Insect silk contains both a Kunitz-type and a unique Kazal-type proteinase inhibitor
X Nirmala et al.
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Reduced hydrolysis of amelogenin may result in X-linked amelogenesis imperfecta
W Li et al.
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ERBIN:: a basolateral PDZ protein that interacts with the mammalian ERBB2/HER2 receptor
JP Borg et al.
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