4.5 Article

Genome-Wide Analysis of Syntenic Gene Deletion in the Grasses

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemical Research Methods

Screening synteny blocks in pairwise genome comparisons through integer programming

Haibao Tang et al.

BMC BIOINFORMATICS (2011)

Article Biochemistry & Molecular Biology

Gene Space Dynamics During the Evolution of Aegilops tauschii, Brachypodium distachyon, Oryza sativa, and Sorghum bicolor Genomes

A. N. Massa et al.

MOLECULAR BIOLOGY AND EVOLUTION (2011)

Article Biochemistry & Molecular Biology

SyMAP v3.4: a turnkey synteny system with application to plant genomes

Carol Soderlund et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Multidisciplinary Sciences

Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss

James C. Schnable et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Multidisciplinary Sciences

Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus

Zhiyong Xiong et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Biotechnology & Applied Microbiology

The collapse of gene complement following whole genome duplication

David Sankoff et al.

BMC GENOMICS (2010)

Article Biochemistry & Molecular Biology

Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor

Ruth A. Swanson-Wagner et al.

GENOME RESEARCH (2010)

Article Multidisciplinary Sciences

Genome sequencing and analysis of the model grass Brachypodium distachyon

John P. Vogel et al.

NATURE (2010)

Article Genetics & Heredity

Genome-wide patterns of genetic variation among elite maize inbred lines

Jinsheng Lai et al.

NATURE GENETICS (2010)

Article Multidisciplinary Sciences

Angiosperm genome comparisons reveal early polyploidy in the monocot lineage

Haibao Tang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Multidisciplinary Sciences

Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes

Yoko Mizuta et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Review Plant Sciences

POLYPLOIDY AND ANGIOSPERM DIVERSIFICATION

Douglas E. Soltis et al.

AMERICAN JOURNAL OF BOTANY (2009)

Review Plant Sciences

The Role of Hybridization in Plant Speciation

Pamela S. Soltis et al.

ANNUAL REVIEW OF PLANT BIOLOGY (2009)

Article Biochemistry & Molecular Biology

Breakpoint regions and homologous synteny blocks in chromosomes have different evolutionary histories

Denis M. Larkin et al.

GENOME RESEARCH (2009)

Article Multidisciplinary Sciences

The Sorghum bicolor genome and the diversification of grasses

Andrew H. Paterson et al.

NATURE (2009)

Review Genetics & Heredity

OPINION The evolutionary significance of ancient genome duplications

Yves Van de Peer et al.

NATURE REVIEWS GENETICS (2009)

Article Biochemistry & Molecular Biology

Insights into corn genes derived from large-scale cDNA sequencing

Nickolai N. Alexandrov et al.

PLANT MOLECULAR BIOLOGY (2009)

Article Multidisciplinary Sciences

Reconstruction of monocotelydoneous proto-chromosomes reveals faster evolution in plants than in animals

Jerome Salse et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Multidisciplinary Sciences

The B73 Maize Genome: Complexity, Diversity, and Dynamics

Patrick S. Schnable et al.

SCIENCE (2009)

Article Biochemistry & Molecular Biology

Many or most genes in Arabidopsis transposed after the origin of the order Brassicales

Michael Freeling et al.

GENOME RESEARCH (2008)

Article Biochemistry & Molecular Biology

Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype

Robert T. Gaeta et al.

PLANT CELL (2007)

Review Multidisciplinary Sciences

Plant speciation

Loren H. Rieseberg et al.

SCIENCE (2007)

Article Biochemistry & Molecular Biology

PAML 4: Phylogenetic analysis by maximum likelihood

Ziheng Yang

MOLECULAR BIOLOGY AND EVOLUTION (2007)

Review Multidisciplinary Sciences

Hybrid speciation

James Mallet

NATURE (2007)

Article Biochemistry & Molecular Biology

The TIGR Rice Genome Annotation Resource: Improvements and new features

Shu Ouyang et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Multidisciplinary Sciences

The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)

G. A. Tuskan et al.

SCIENCE (2006)

Article Biochemistry & Molecular Biology

Gene-balanced duplications, like tetraploidy, provide predictable drive to increase morphological complexity

Michael Freeling et al.

GENOME RESEARCH (2006)

Article Multidisciplinary Sciences

Dinosaur coprolites and the early evolution of grasses and grazers

V Prasad et al.

SCIENCE (2005)

Article Biochemistry & Molecular Biology

Two rounds of whole genome duplication in the ancestral vertebrate

P Dehal et al.

PLOS BIOLOGY (2005)

Article Biochemistry & Molecular Biology

The Genomes of Oryza sativa:: A history of duplications

J Yu et al.

PLOS BIOLOGY (2005)

Article Genetics & Heredity

Genomic duplication, fractionation and the origin of regulatory novelty

RJ Langham et al.

GENETICS (2004)

Article Biochemistry & Molecular Biology

Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution

G Blanc et al.

PLANT CELL (2004)

Article Multidisciplinary Sciences

Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics

AH Paterson et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)

Article Biochemistry & Molecular Biology

Close split of sorghum and maize genome progenitors

Z Swigonová et al.

GENOME RESEARCH (2004)

Review Genetics & Heredity

Understanding mechanisms of novel gene expression in polyploids

TC Osborn et al.

TRENDS IN GENETICS (2003)

Article Multidisciplinary Sciences

A draft sequence of the rice genome (Oryza sativa L. ssp japonica)

SA Goff et al.

SCIENCE (2002)