相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Screening synteny blocks in pairwise genome comparisons through integer programming
Haibao Tang et al.
BMC BIOINFORMATICS (2011)
Gene Space Dynamics During the Evolution of Aegilops tauschii, Brachypodium distachyon, Oryza sativa, and Sorghum bicolor Genomes
A. N. Massa et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
SyMAP v3.4: a turnkey synteny system with application to plant genomes
Carol Soderlund et al.
NUCLEIC ACIDS RESEARCH (2011)
Seventy Million Years of Concerted Evolution of a Homoeologous Chromosome Pair, in Parallel, in Major Poaceae Lineages
Xiyin Wang et al.
PLANT CELL (2011)
Genes Identified by Visible Mutant Phenotypes Show Increased Bias toward One of Two Subgenomes of Maize
James C. Schnable et al.
PLOS ONE (2011)
Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss
James C. Schnable et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus
Zhiyong Xiong et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Dose-sensitivity, conserved non-coding sequences, and duplicate gene retention through multiple tetraploidies in the grasses
James C. Schnable et al.
FRONTIERS IN PLANT SCIENCE (2011)
The collapse of gene complement following whole genome duplication
David Sankoff et al.
BMC GENOMICS (2010)
Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor
Ruth A. Swanson-Wagner et al.
GENOME RESEARCH (2010)
Characterization of duplicate gene evolution in the recent natural allopolyploid Tragopogon miscellus by next-generation sequencing and Sequenom iPLEX MassARRAY genotyping
Richard J. A. Buggs et al.
MOLECULAR ECOLOGY (2010)
Genome sequencing and analysis of the model grass Brachypodium distachyon
John P. Vogel et al.
NATURE (2010)
Genome-wide patterns of genetic variation among elite maize inbred lines
Jinsheng Lai et al.
NATURE GENETICS (2010)
Evolutionary rate variation, genomic dominance and duplicate gene expression evolution during allotetraploid cotton speciation
Lex E. Flagel et al.
NEW PHYTOLOGIST (2010)
Angiosperm genome comparisons reveal early polyploidy in the monocot lineage
Haibao Tang et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes
Yoko Mizuta et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Following Tetraploidy in Maize, a Short Deletion Mechanism Removed Genes Preferentially from One of the Two Homeologs
Margaret R. Woodhouse et al.
PLOS BIOLOGY (2010)
Homoeolog-specific retention and use in allotetraploid Arabidopsis suecica depends on parent of origin and network partners
Peter L. Chang et al.
GENOME BIOLOGY (2010)
POLYPLOIDY AND ANGIOSPERM DIVERSIFICATION
Douglas E. Soltis et al.
AMERICAN JOURNAL OF BOTANY (2009)
The Role of Hybridization in Plant Speciation
Pamela S. Soltis et al.
ANNUAL REVIEW OF PLANT BIOLOGY (2009)
Breakpoint regions and homologous synteny blocks in chromosomes have different evolutionary histories
Denis M. Larkin et al.
GENOME RESEARCH (2009)
The Sorghum bicolor genome and the diversification of grasses
Andrew H. Paterson et al.
NATURE (2009)
OPINION The evolutionary significance of ancient genome duplications
Yves Van de Peer et al.
NATURE REVIEWS GENETICS (2009)
Insights into corn genes derived from large-scale cDNA sequencing
Nickolai N. Alexandrov et al.
PLANT MOLECULAR BIOLOGY (2009)
Reconstruction of monocotelydoneous proto-chromosomes reveals faster evolution in plants than in animals
Jerome Salse et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Divergent Evolution of Duplicate Genes Leads to Genetic Incompatibilities Within A-thaliana
David Bikard et al.
SCIENCE (2009)
The B73 Maize Genome: Complexity, Diversity, and Dynamics
Patrick S. Schnable et al.
SCIENCE (2009)
Exceptional Diversity, Non-Random Distribution, and Rapid Evolution of Retroelements in the B73 Maize Genome
Regina S. Baucom et al.
PLOS GENETICS (2009)
Maize Inbreds Exhibit High Levels of Copy Number Variation (CNV) and Presence/Absence Variation (PAV) in Genome Content
Nathan M. Springer et al.
PLOS GENETICS (2009)
Many or most genes in Arabidopsis transposed after the origin of the order Brassicales
Michael Freeling et al.
GENOME RESEARCH (2008)
Multiple Paleopolyploidizations during the Evolution of the Compositae Reveal Parallel Patterns of Duplicate Gene Retention after Millions of Years
Michael S. Barker et al.
MOLECULAR BIOLOGY AND EVOLUTION (2008)
The Value of Nonmodel Genomes and an Example Using SynMap Within CoGe to Dissect the Hexaploidy that Predates the Rosids
Eric Lyons et al.
Tropical Plant Biology (2008)
Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype
Robert T. Gaeta et al.
PLANT CELL (2007)
PAML 4: Phylogenetic analysis by maximum likelihood
Ziheng Yang
MOLECULAR BIOLOGY AND EVOLUTION (2007)
G-boxes, bigfoot genes, and environmental response:: Characterization of intragenomic conserved noncoding sequences in Arabidopsis
Michael Freeling et al.
PLANT CELL (2007)
Reciprocal gene loss between Tetraodon and zebrafish after whole genome duplication in their ancestor
Marie Semon et al.
TRENDS IN GENETICS (2007)
The TIGR Rice Genome Annotation Resource: Improvements and new features
Shu Ouyang et al.
NUCLEIC ACIDS RESEARCH (2007)
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
G. A. Tuskan et al.
SCIENCE (2006)
Following tetraploidy in an Arabidopsis ancestor, genes were removed preferentially from one homeolog leaving clusters enriched in dose-sensitive genes
Brian C. Thomas et al.
GENOME RESEARCH (2006)
Gene-balanced duplications, like tetraploidy, provide predictable drive to increase morphological complexity
Michael Freeling et al.
GENOME RESEARCH (2006)
Multiple rounds of speciation associated with reciprocal gene loss in polyploid yeasts
DR Scannell et al.
NATURE (2006)
Dinosaur coprolites and the early evolution of grasses and grazers
V Prasad et al.
SCIENCE (2005)
Two rounds of whole genome duplication in the ancestral vertebrate
P Dehal et al.
PLOS BIOLOGY (2005)
The Genomes of Oryza sativa:: A history of duplications
J Yu et al.
PLOS BIOLOGY (2005)
Genomic duplication, fractionation and the origin of regulatory novelty
RJ Langham et al.
GENETICS (2004)
Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution
G Blanc et al.
PLANT CELL (2004)
Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics
AH Paterson et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Close split of sorghum and maize genome progenitors
Z Swigonová et al.
GENOME RESEARCH (2004)
Genome duplication led to highly selective expansion of the Arabidopsis thaliana proteome
C Seoighe et al.
TRENDS IN GENETICS (2004)
Understanding mechanisms of novel gene expression in polyploids
TC Osborn et al.
TRENDS IN GENETICS (2003)
A draft sequence of the rice genome (Oryza sativa L. ssp japonica)
SA Goff et al.
SCIENCE (2002)
The origin of interspecific genomic incompatibility via gene duplication
M Lynch et al.
AMERICAN NATURALIST (2000)