4.7 Review

The functional basis of adaptive evolution in chemostats

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biotechnology & Applied Microbiology

A case of adaptation through a mutation in a tandem duplication during experimental evolution in Escherichia coli

Ram P. Maharjan et al.

BMC GENOMICS (2013)

Article Mechanics

Statistical questions in experimental evolution

Michael M. Desai

JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT (2013)

Article Biochemistry & Molecular Biology

Genetic and Nongenetic Determinants of Cell Growth Variation Assessed by High-Throughput Microscopy

Naomi Ziv et al.

MOLECULAR BIOLOGY AND EVOLUTION (2013)

Article Biochemistry & Molecular Biology

Parallel Evolutionary Dynamics of Adaptive Diversification in Escherichia coli

Matthew D. Herron et al.

PLOS BIOLOGY (2013)

Article Multidisciplinary Sciences

The Use of Chemostats in Microbial Systems Biology

Naomi Ziv et al.

JOVE-JOURNAL OF VISUALIZED EXPERIMENTS (2013)

Article Genetics & Heredity

Nutritional Control of Growth and Development in Yeast

James R. Broach

GENETICS (2012)

Review Biochemistry & Molecular Biology

Evolutionary insight from whole-genome sequencing of experimentally evolved microbes

Jeremy R. Dettman et al.

MOLECULAR ECOLOGY (2012)

Article Multidisciplinary Sciences

Rate and molecular spectrum of spontaneous mutations in the bacterium Escherichia coli as determined by whole-genome sequencing

Heewook Lee et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Multidisciplinary Sciences

Chromosomal duplication is a transient evolutionary solution to stress

Avihu H. Yona et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Multidisciplinary Sciences

PRESIDENTIAL ADDRESS Transposable Elements, Epigenetics, and Genome Evolution

Nina V. Fedoroff

SCIENCE (2012)

Article Biotechnology & Applied Microbiology

The multiplicity of divergence mechanisms in a single evolving population

Ram P. Maharjan et al.

GENOME BIOLOGY (2012)

Review Microbiology

Growth rate regulation in Escherichia coli

Ding Jun Jin et al.

FEMS MICROBIOLOGY REVIEWS (2012)

Article Biochemistry & Molecular Biology

Identification of Aneuploidy-Selective Antiproliferation Compounds

Yun-Chi Tang et al.

Article Genetics & Heredity

Target of Rapamycin (TOR) in Nutrient Signaling and Growth Control

Robbie Loewith et al.

GENETICS (2011)

Article Biochemistry & Molecular Biology

Insertion Sequence-Driven Evolution of Escherichia coli in Chemostats

Joel Gaffe et al.

JOURNAL OF MOLECULAR EVOLUTION (2011)

Article Multidisciplinary Sciences

Negative Epistasis Between Beneficial Mutations in an Evolving Bacterial Population

Aisha I. Khan et al.

SCIENCE (2011)

Article Multidisciplinary Sciences

Diminishing Returns Epistasis Among Beneficial Mutations Decelerates Adaptation

Hsin-Hung Chou et al.

SCIENCE (2011)

Article Biotechnology & Applied Microbiology

Whole-genome sequencing of a laboratory-evolved yeast strain

Carlos L. Araya et al.

BMC GENOMICS (2010)

Article Biochemistry & Molecular Biology

Identification of Aneuploidy-Tolerating Mutations

Eduardo M. Torres et al.

Article Cell Biology

Dr Jekyll and Mr Hyde: role of aneuploidy in cellular adaptation and cancer

Norman Pavelka et al.

CURRENT OPINION IN CELL BIOLOGY (2010)

Review Biotechnology & Applied Microbiology

The renaissance of continuous culture in the post-genomics age

Alan T. Bull

JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY (2010)

Article Cell Biology

Growth-limiting Intracellular Metabolites in Yeast Growing under Diverse Nutrient Limitations

Viktor M. Boer et al.

MOLECULAR BIOLOGY OF THE CELL (2010)

Article Biochemistry & Molecular Biology

The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function

David Warde-Farley et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Multidisciplinary Sciences

Adaptation to diverse nitrogen-limited environments by deletion or extrachromosomal element formation of the GAP1 locus

David Gresham et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Review Physiology

Microbial experimental evolution

Albert F. Bennett et al.

AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY (2009)

Article Cell Biology

Slow Growth Induces Heat-Shock Resistance in Normal and Respiratory-deficient Yeast

Charles Lu et al.

MOLECULAR BIOLOGY OF THE CELL (2009)

Review Multidisciplinary Sciences

The Beagle in a bottle

Angus Buckling et al.

NATURE (2009)

Article Genetics & Heredity

Copy Number Variation in Intron 1 of SOX5 Causes the Pea-comb Phenotype in Chickens

Dominic Wright et al.

PLOS GENETICS (2009)

Article Genetics & Heredity

E Unibus Plurum: Genomic Analysis of an Experimentally Evolved Polymorphism in Escherichia coli

Margie A. Kinnersley et al.

PLOS GENETICS (2009)

Review Genetics & Heredity

How Saccharomyces Responds to Nutrients

Shadia Zaman et al.

ANNUAL REVIEW OF GENETICS (2008)

Review Microbiology

(p)ppGpp: Still Magical?

Katarzyna Potrykus et al.

ANNUAL REVIEW OF MICROBIOLOGY (2008)

Review Microbiology

Control of bacterial transcription, translation and replication by (p)ppGpp

Anjana Srivatsan et al.

CURRENT OPINION IN MICROBIOLOGY (2008)

Article Cell Biology

Coordination of growth rate, cell cycle, stress response, and metabolic activity in yeast

Matthew J. Brauer et al.

MOLECULAR BIOLOGY OF THE CELL (2008)

Article Multidisciplinary Sciences

Influence of genotype and nutrition on survival and metabolism of starving yeast

Viktor M. Boer et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Multidisciplinary Sciences

A genome-wide view of the spectrum of spontaneous mutations in yeast

Michael Lynch et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Genetics & Heredity

Diet and the evolution of human amylase gene copy number variation

George H. Perry et al.

NATURE GENETICS (2007)

Article Multidisciplinary Sciences

Effects of aneuploidy on cellular physiology and cell division in haploid yeast

Eduardo M. Torres et al.

SCIENCE (2007)

Article Multidisciplinary Sciences

Multiple high-throughput analyses monitor the response of E-coli to perturbations

Nobuyoshi Ishii et al.

SCIENCE (2007)

Review Genetics & Heredity

Mechanistic approaches to the study of evolution: the functional synthesis

Antony M. Dean et al.

NATURE REVIEWS GENETICS (2007)

Article Genetics & Heredity

Global mapping of transposon location

Abram Gabriel et al.

PLOS GENETICS (2006)

Review Biotechnology & Applied Microbiology

Experimental evolution with yeast

Clifford Zeyl

FEMS YEAST RESEARCH (2006)

Article Multidisciplinary Sciences

Clonal adaptive radiation in a constant environment

Ram Maharjan et al.

SCIENCE (2006)

Article Biotechnology & Applied Microbiology

Growth-rate regulated genes have profound impact on interpretation of transcriptome profiling in Saccharomyces cerevisiae

Birgitte Regenberg et al.

GENOME BIOLOGY (2006)

Review Microbiology

Escherichia coli starvation diets:: Essential nutrients weigh in distinctly

CN Peterson et al.

JOURNAL OF BACTERIOLOGY (2005)

Review Microbiology

Continuous culture - making a comeback?

PA Hoskisson et al.

MICROBIOLOGY-SGM (2005)

Review Biochemistry & Molecular Biology

Maintaining a healthy SPANC balance through regulatory and mutational adaptation

T Ferenci

MOLECULAR MICROBIOLOGY (2005)

Article Biotechnology & Applied Microbiology

Analysis of gene expression in Escherichia coli in response to changes of growth-limiting nutrient in chemostat cultures

Q Hua et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)

Article Cell Biology

Nutritional homeostasis in batch and steady-state culture of yeast

AJ Saldanha et al.

MOLECULAR BIOLOGY OF THE CELL (2004)

Article Multidisciplinary Sciences

Evolutionary genomics of ecological specialization

SB Zhong et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)

Review Biochemistry & Molecular Biology

How cells coordinate growth and division

P Jorgensen et al.

CURRENT BIOLOGY (2004)

Article Microbiology

Microbial evolution in laboratory environments

J Adams

RESEARCH IN MICROBIOLOGY (2004)

Review Genetics & Heredity

Evolution experiments with microorganisms: The dynamics and genetic bases of adaptation

SF Elena et al.

NATURE REVIEWS GENETICS (2003)

Article Biochemistry & Molecular Biology

TOR and PKA signaling pathways converge on the protein kinase Rim15 to control entry into G(0)

I Pedruzzi et al.

MOLECULAR CELL (2003)

Article Multidisciplinary Sciences

Characteristic genome rearrangements in experimental evolution of Saccharomyces cerevisiae

MJ Dunham et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)

Review Biotechnology & Applied Microbiology

Auxotrophic yeast strains in fundamental and applied research

JT Pronk

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2002)

Review Microbiology

Hungry bacteria - definition and properties of a nutritional state

T Ferenci

ENVIRONMENTAL MICROBIOLOGY (2001)

Article Genetics & Heredity

Widespread aneuploidy revealed by DNA microarray expression profiling

TR Hughes et al.

NATURE GENETICS (2000)