相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Quantitative Proteomics Reveals Subset-Specific Viral Recognition in Dendritic Cells
Christian A. Luber et al.
IMMUNITY (2010)
Increased Apoptosis after Autoimmune Regulator Expression in Epithelial Cells Revealed by a Combined Quantitative Proteomics Approach
Nuria Colome et al.
JOURNAL OF PROTEOME RESEARCH (2010)
MSQuant, an Open Source Platform for Mass Spectrometry-Based Quantitative Proteomics
Peter Mortensen et al.
JOURNAL OF PROTEOME RESEARCH (2010)
Integrative Proteomic Analysis of Serum and Peritoneal Fluids Helps Identify Proteins that Are Up-Regulated in Serum of Women with Ovarian Cancer
Lynn M. Amon et al.
PLOS ONE (2010)
Comparative analysis of the secretory proteome of human adipose stromal vascular fraction cells during adipogenesis
Jaeyoon Kim et al.
PROTEOMICS (2010)
Differential proteomic analysis using isotope-coded protein-labeling strategies: Comparison, improvements and application to simulated microgravity effect on Cupriavidus metallidurans CH34
Baptiste Leroy et al.
PROTEOMICS (2010)
ICPLQuant - A software for non-isobaric isotopic labeling proteomics
Achim Brunner et al.
PROTEOMICS (2010)
Shotgun proteomics identifies proteins specific for acute renal transplant rejection
Tara K. Sigdel et al.
PROTEOMICS CLINICAL APPLICATIONS (2010)
Clinical proteomics of myeloid leukemia
Sigrun M. Hjelle et al.
GENOME MEDICINE (2010)
Absolute Quantification of Potential Cancer Markers in Clinical Tissue Homogenates Using Multiple Reaction Monitoring on a Hybrid Triple Quadrupole/Linear Ion Trap Tandem Mass Spectrometer
Leroi V. DeSouza et al.
ANALYTICAL CHEMISTRY (2009)
Regulation and Cellular Roles of Ubiquitin-Specific Deubiquitinating Enzymes
Francisca E. Reyes-Turcu et al.
ANNUAL REVIEW OF BIOCHEMISTRY (2009)
Proteomics by Mass Spectrometry: Approaches, Advances, and Applications
John R. Yates et al.
Annual Review of Biomedical Engineering (2009)
Methods for quantitation of gene expression
Vigdis Nygaard et al.
FRONTIERS IN BIOSCIENCE-LANDMARK (2009)
Applications of Proteomics in the Study of Inflammatory Bowel Diseases: Current Status and Future Directions with Available Technologies
Philip Alex et al.
INFLAMMATORY BOWEL DISEASES (2009)
Temporal Analysis of Neural Differentiation Using Quantitative Proteomics
Raghothama Chaerkady et al.
JOURNAL OF PROTEOME RESEARCH (2009)
2D-DIGE as a Strategy To Identify Serum Markers for the Progression of Prostate Cancer
Jennifer C. Byrne et al.
JOURNAL OF PROTEOME RESEARCH (2009)
Temporal Quantitative Proteomics by iTRAQ 2D-LC-MS/MS and Corresponding mRNA Expression Analysis Identify Post-Transcriptional Modulation of Actin-Cytoskeleton Regulators During TGF-beta-induced Epithelial-Mesenchymal Transition
Venkateshwar G. Keshamouni et al.
JOURNAL OF PROTEOME RESEARCH (2009)
Temporal Profiling of the Adipocyte Proteome during Differentiation Using a Five-Plex SILAC Based Strategy
Henrik Molina et al.
JOURNAL OF PROTEOME RESEARCH (2009)
A Straightforward and Highly Efficient Precipitation/On-Pellet Digestion Procedure Coupled with a Long Gradient Nano-LC Separation and Orbitrap Mass Spectrometry for Label-Free Expression Profiling of the Swine Heart Mitochondrial Proteome
Xiaotao Duan et al.
JOURNAL OF PROTEOME RESEARCH (2009)
IDAWG: Metabolic Incorporation of Stable Isotope Labels for Quantitative Glycomics of Cultured Cells
Ron Orlando et al.
JOURNAL OF PROTEOME RESEARCH (2009)
Efficient Isolation and Quantitative Proteomic Analysis of Cancer Cell Plasma Membrane Proteins for Identification of Metastasis-Associated Cell Surface Markers
Rikke Lund et al.
JOURNAL OF PROTEOME RESEARCH (2009)
IDENTIFICATION OF PROTEINS INVOLVED IN INFECTIVITY AND ENTEROTOXIN PRODUCTION IN ENTEROBACTER SAKAZAKII
Jielin Yang et al.
JOURNAL OF RAPID METHODS AND AUTOMATION IN MICROBIOLOGY (2009)
Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) and Quantitative Comparison of the Membrane Proteomes of Self-renewing and Differentiating Human Embryonic Stem Cells
Tatyana A. Prokhorova et al.
MOLECULAR & CELLULAR PROTEOMICS (2009)
Multiplex peptide stable isotope dimethyl labeling for quantitative proteomics
Paul J. Boersema et al.
NATURE PROTOCOLS (2009)
iTRAQ-coupled 2-D LC-MS/MS analysis of protein profile associated with HBV-modulated DNA methylation
Dandan Niu et al.
PROTEOMICS (2009)
Deep depletion of abundant serum proteins reveals low-abundant proteins as potential biomarkers for human ovarian cancer
Biaoyang Lin et al.
PROTEOMICS CLINICAL APPLICATIONS (2009)
Prostate cancer proteomics: The urgent need for clinically validated biomarkers
Caroline A. Evans et al.
PROTEOMICS CLINICAL APPLICATIONS (2009)
The effects of infliximab therapy on the serum proteome of rheumatoid arthritis patients
Ravi C. Dwivedi et al.
ARTHRITIS RESEARCH & THERAPY (2009)
Relative quantification of proteins in human cerebrospinal fluids by MS/MS using 6-plex isobaric tags
Loic Dayon et al.
ANALYTICAL CHEMISTRY (2008)
Synthesis and proteomic activity evaluation of a new isotope-coded affinity tagging (ICAT) reagent
Annalisa Guaragna et al.
BIOCONJUGATE CHEMISTRY (2008)
The APEX Quantitative Proteomics Tool: Generating protein quantitation estimates from LC-MS/MS proteomics results
John C. Braisted et al.
BMC BIOINFORMATICS (2008)
Active caspase-1 is a regulator of unconventional protein secretion
Martin Keller et al.
CELL (2008)
SILAC mouse for quantitative proteomics uncovers kindlin-3 as an essential factor for red blood cell function
Marcus Krueger et al.
CELL (2008)
Proteomics: New technologies and clinical applications
Martin Latterich et al.
EUROPEAN JOURNAL OF CANCER (2008)
Combination of affinity depletion of abundant proteins and reversed-phase fractionation in proteomic analysis of human plasma/serum
Nina Zolotarjova et al.
JOURNAL OF CHROMATOGRAPHY A (2008)
Search for potential markers for prostate cancer diagnosis, prognosis and treatment in clinical tissue specimens using amine-specific isobaric tagging (iTRAQ) with two-dimensional liquid chromatography and tandem mass spectrometry
Spiros D. Garbis et al.
JOURNAL OF PROTEOME RESEARCH (2008)
Multiple reaction monitoring of mTRAQ-labeled peptides enables absolute quantification of endogenous levels of a potential cancer marker in cancerous and normal endometrial tissues
Leroi V. DeSouza et al.
JOURNAL OF PROTEOME RESEARCH (2008)
Quantitative analysis of global ubiquitination in HeLa cells by mass spectrometry
David Meierhofer et al.
JOURNAL OF PROTEOME RESEARCH (2008)
Quantitative analysis of redox-sensitive proteome with DIGE and ICAT
Cexiong Fu et al.
JOURNAL OF PROTEOME RESEARCH (2008)
18O labeling over a coffee break:: A rapid strategy for quantitative proteomics
Shama P. Mirza et al.
JOURNAL OF PROTEOME RESEARCH (2008)
Absolute SILAC for accurate quantitation of proteins in complex mixtures down to the attomole level
Stefan Hanke et al.
JOURNAL OF PROTEOME RESEARCH (2008)
Quantitative whole-cell proteome analysis of pseudorabies virus-infected cells
Martin Skiba et al.
JOURNAL OF VIROLOGY (2008)
Analysis of the zebrafish proteome during embryonic development
Margaret B. Lucitt et al.
MOLECULAR & CELLULAR PROTEOMICS (2008)
Metadegradomics TOWARD IN VIVO QUANTITATIVE DEGRADOMICS OF PROTEOLYTIC POST-TRANSLATIONAL MODIFICATIONS OF THE CANCER PROTEOME
Alain Doucet et al.
MOLECULAR & CELLULAR PROTEOMICS (2008)
Prevention of amino acid conversion in SILAC experiments with embryonic stem cells
Sean C. Bendall et al.
MOLECULAR & CELLULAR PROTEOMICS (2008)
Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast
Lyris M. F. de Godoy et al.
NATURE (2008)
Application of 2-dimensional difference gel electrophoresis (2D-DIGE) to the study of thrombin-activated human platelet secretome
Anna Della Corte et al.
PLATELETS (2008)
Comparative LC-MS: A landscape of peaks and valleys
Antoine H. P. America et al.
PROTEOMICS (2008)
Quantitative phosphoproteome analysis of a mouse liver cell line reveals specificity of phosphatase inhibitors
Cuiping Pan et al.
PROTEOMICS (2008)
Bioengineering a humanized acne microenvironment model:: Proteomics analysis of host responses to Propionibacterium acnes infection in vivo
Teruaki Nakatsuji et al.
PROTEOMICS (2008)
Comprehensive proteomic analysis of protein changes during platelet storage requires complementary proteomic approaches
Jonathan N. Thon et al.
TRANSFUSION (2008)
An immunoaffinity tandem mass spectrometry (iMALDI) assay for detection of Francisella tularensis
Jian Jiang et al.
ANALYTICA CHIMICA ACTA (2007)
Quantitative proteornes and in vivo secretomes of progressive and regressive UV-induced fibrosarcoma tumor cells:: Mimicking tumor microenvironment using a dermis-based cell-trapped system linked to tissue chamber
Yang Shi et al.
PROTEOMICS (2007)
Proteomics studies of pancreatic cancer
Ru Chen et al.
PROTEOMICS CLINICAL APPLICATIONS (2007)
Sequence-specific retention calculator. A family of peptide retention time prediction algorithms in reversed-phase HPLC: Applicability to various chromatographic conditions and columns
Vic Spicer et al.
ANALYTICAL CHEMISTRY (2007)
Quantitative chemical proteomics reveals mechanisms of action of clinical ABL kinase inhibitors
Marcus Bantscheff et al.
NATURE BIOTECHNOLOGY (2007)
Proteomic analysis of human vitreous fluid by fluorescence-based difference gel electrophoresis (DIGE):: a new strategy for identifying potential candidates in the pathogenesis of proliferative diabetic retinopathy
M. Garcia-Ramirez et al.
DIABETOLOGIA (2007)
Functional and quantitative proteomics using SILAC
Matthias Mann
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2006)
Chromatographic alignment of ESI-LC-MS proteomics data sets by ordered bijective interpolated warping
John T. Prince et al.
ANALYTICAL CHEMISTRY (2006)
Protein Equalizer™ Technology:: The quest for a democratic proteome
Pier Giorgio Righetti et al.
PROTEOMICS (2006)
Label-free protein quantification using LC-coupled ion trap or FT mass spectrometry: Reproducibility, linearity, and application with complex proteomes
GH Wang et al.
JOURNAL OF PROTEOME RESEARCH (2006)
A perspective on the use of iTRAQ™ reagent technology for protein complex and profiling studies
LR Zieske
JOURNAL OF EXPERIMENTAL BOTANY (2006)
Comparative study of three proteomic quantitative methods, DIGE, cICAT, and iTRAQ, using 2D gel- or LC-MALDI TOF/TOF
WW Wu et al.
JOURNAL OF PROTEOME RESEARCH (2006)
Proteins associated with cisplatin resistance in ovarian cancer cells identified by quantitative proteomic technology and integrated with mRNA expression levels
JJ Stewart et al.
MOLECULAR & CELLULAR PROTEOMICS (2006)
Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules
Y Zhang et al.
MOLECULAR & CELLULAR PROTEOMICS (2005)
The development of the DIGE system: 2D fluorescence difference gel analysis technology
R Marouga et al.
ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2005)
Quantitative proteomic analysis by accurate mass retention time pairs
JC Silva et al.
ANALYTICAL CHEMISTRY (2005)
Application of isotope coded affinity tag (ICAT) analysis for the identification of differentially expressed proteins following infection of Atlantic salmon (Salmo salar) with infectious hematopoietic necrosis virus (IHNV) or Renibacterium salmoninarum (BKD)
AT Booy et al.
JOURNAL OF PROTEOME RESEARCH (2005)
Proteomic profiling and neurodegeneration in West-Nile-virus-infected neurons
V Dhingra et al.
JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY (2005)
A novel strategy for quantitative proteornics using isotope-coded protein labels
A Schmidt et al.
PROTEOMICS (2005)
Mass spectrometric quantitation of peptides and proteins using stable isotope standards and capture by anti-peptide antibodies (SISCAPA)
NL Anderson et al.
JOURNAL OF PROTEOME RESEARCH (2004)
A model for random sampling and estimation of relative protein abundance in shotgun proteomics
HB Liu et al.
ANALYTICAL CHEMISTRY (2004)
ProMoST (Protein Modification Screening Tool): a web-based tool for mapping protein modifications on two-dimensional gels
BD Halligan et al.
NUCLEIC ACIDS RESEARCH (2004)
Quantitative cancer proteomics: Stable isotope labeling with amino acids in cell culture (SILAC) as a tool for prostate cancer research
PA Everley et al.
MOLECULAR & CELLULAR PROTEOMICS (2004)
A dataset of human liver proteins identified by protein profiling via isotope-coded affinity tag (ICAT) and tandem mass spectrometry
W Yan et al.
MOLECULAR & CELLULAR PROTEOMICS (2004)
RNA and RNA binding proteins participate in early stages of cell spreading through spreading initiation centers
CL de Hoog et al.
CELL (2004)
Phosphorylations of cyclin-dependent kinase 2 revisited using two-dimensional gel electrophoresis
K Coulonval et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS
SA Gerber et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Tandem mass tags:: A novel quantification strategy for comparative analysis of complex protein mixtures by MS/MS
A Thompson et al.
ANALYTICAL CHEMISTRY (2003)
Two-dimensional gel electrophoresis; better than a poke in the ICAT?
WF Patton et al.
CURRENT OPINION IN BIOTECHNOLOGY (2002)
Detection technologies in proteome analysis
WF Patton
JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES (2002)
Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
SE Ong et al.
MOLECULAR & CELLULAR PROTEOMICS (2002)
Mass spectrometry in coupling with affinity capture-release and isotope-coded affinity tags for quantitative protein analysis
F Turecek
JOURNAL OF MASS SPECTROMETRY (2002)
Peptide analysis by rapid, orthogonal technologies with high separation selectivities and sensitivities
MTW Hearn
BIOLOGICALS (2001)
Large-scale analysis of the yeast proteome by multidimensional protein identification technology
MP Washburn et al.
NATURE BIOTECHNOLOGY (2001)
Mass spectrometry in proteomics
R Aebersold et al.
CHEMICAL REVIEWS (2001)