期刊
ANNALS OF FOREST SCIENCE
卷 73, 期 1, 页码 77-103出版社
SPRINGER FRANCE
DOI: 10.1007/s13595-015-0488-3
关键词
Genomics; Forest trees; Developmentalbiology; Epigenetics; Interactome; Micro-evolution; Breeding and conservation
类别
资金
- French National Research Agency [ARBRE: ANR-12-LABXARBRE-01, FLAG: ANR-12-ADAP-0007-01, GENOAK: 2011-BSV6-009-01, XYLOFOREST: ANR-10-EQPX-16, GENOQB: ANR-05-GPLA-027, SUSTAINPINE: ANR-09-KBBE-007, SYLVABIOM: ANR-08-BIOE-0006, SYBIOPOP: ANR-13-JSV6- 0001]
- European Community Seventh Framework Programme [ProCoGen: FP7-289841, WatBio: FP7-311929]
- Eranet Biodiversa (LinkTree and TipTree)
- Conseil Regional de la Region Centre [EMBRYOME 33639]
- Conseil Regional de la Region Aquitaine [EMBRYO2011 09012579-045]
- EFPA division of INRA (AAP projets innovants)
- French Ministere de la Recherche et Enseignement Superieur
- INRA SELGEN metaprogram (R2D2)
- Spanish Ministry for Science and Innovation (Ramon y Cajal program) [RYC2009-04537]
- Spanish Ministry for Economics and Competitiveness (AFFLORA project) [CGL2012-40129-C02-02]
Key message This review highlights some of the discoveries and applications made possible by omics technologies over the last 10 years and provides perspectives for pioneering research to increase our understanding of tree biology. Context A decade after the first forest tree genome sequence was released into the public domain, the rapidly evolving genomics and bioinformatics toolbox has advanced our understanding of the structure, functioning, and evolution of forest tree genomes. Aims and methods This review highlights some of the discoveries and applications that omics technologies have made possible for forest trees over the past 10 years. Results In this review, we start by our current understanding of genome evolution and intricacies of gene regulation for reproduction, development, and responses to biotic and abiotic stresses. We then skim over advances in interactome analysis and epigenomics, the knowledge of the extent of genetic variation within and between species, revealing micro- and macro-evolutionary processes and species history, together with the complex architecture of quantitative traits. We finally end with applications in genetic resource conservation and breeding. Conclusion The knowledge gained through the use of these technologies has a huge potential impact for adapting forests to the main challenges they will have to face: changing demand from ecosystem services with potentially conflicting strategies in terms of conservation and use, as well as climate changes and associated threats. Genomics will undoubtedly play a major role over the next decade and beyond, not only to further understand the mechanisms underlying adaptation and evolution but also to develop and implement innovative management and policy actions to preserve the adaptability of natural forests and intensively managed plantations.
作者
我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。
推荐
暂无数据