期刊
ENVIRONMENTAL MODELLING & SOFTWARE
卷 61, 期 -, 页码 249-265出版社
ELSEVIER SCI LTD
DOI: 10.1016/j.envsoft.2014.04.002
关键词
Hydrodynamics; Ecological modelling; Biogeochemical modelling; Coupling; Framework
类别
资金
- EC [212085]
- Helmholtz-Zentrum Geesthacht, Centre for Materials and Coastal Research, Germany
- NERC [pml010006, NE/K001876/1, pml010010] Funding Source: UKRI
- Natural Environment Research Council [pml010010, NE/K001876/1, pml010006] Funding Source: researchfish
One of the most of challenging steps in the development of coupled hydrodynamic-biogeochemical models is the combination of multiple, often incompatible computer codes that describe individual physical, chemical, biological and geological processes. This coupling is time-consuming, error-prone, and demanding in terms of scientific and programming expertise. The open source, Fortran-based Framework for Aquatic Biogeochemical Models addresses these problems by providing a consistent set of programming interfaces through which hydrodynamic and biogeochemical models communicate. Models are coded once to connect to FABM, after which arbitrary combinations of hydrodynamic and biogeochemical models can be made. Thus, a biogeochemical model code works unmodified within models of a chemostat, a vertically structured water column, and a three-dimensional basin. Moreover, complex biogeochemistry can be distributed over many compact, self-contained modules, coupled at run-time. By enabling distributed development and user-controlled coupling of biogeochemical models, FABM enables optimal use of the expertise of scientists, programmers and end-users. (C) 2014 Elsevier Ltd. All rights reserved.
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