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Paul V. Attwood
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS (2013)
Studying the fragmentation behavior of peptides with arginine phosphorylation and its influence on phospho-site localization
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PROTEOMICS (2013)
Protein carbamylation: In vivo modification or in vitro artefact?
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Examining factors that influence erroneous phosphorylation site localization via competing fragmentation and rearrangement reactions during ion trap CID-MS/MS and -MS3
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PROTEOMICS (2013)
Interlaboratory studies and initiatives developing standards for proteomics
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PROTEOMICS (2013)
D-score: A search engine independent MD-score
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A Complex Standard for Protein Identification, Designed by Evolution
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JOURNAL OF PROTEOME RESEARCH (2012)
Combinatorial Use of Electrostatic Repulsion-Hydrophilic Interaction Chromatography (ERLIC) and Strong Cation Exchange (SCX) Chromatography for In-Depth Phosphoproteome Analysis
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JOURNAL OF PROTEOME RESEARCH (2012)
Systematic and quantitative comparison of digest efficiency and specificity reveals the impact of trypsin quality on MS-based proteomics
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JOURNAL OF PROTEOMICS (2012)
TiSH - a robust and sensitive global phosphoproteomics strategy employing a combination of TiO2, SIMAC, and HILIC
Kasper Engholm-Keller et al.
JOURNAL OF PROTEOMICS (2012)
Improving Depth in Phosphoproteomics by Using a Strong Cation Exchange-Weak Anion Exchange-Reversed Phase Multidimensional Separation Approach
Marco L. Hennrich et al.
ANALYTICAL CHEMISTRY (2011)
Two-Component Systems and Their Co-Option for Eukaryotic Signal Transduction
G. Eric Schaller et al.
CURRENT BIOLOGY (2011)
Comparison of Three Quantitative Phosphoproteomic Strategies to Study Receptor Tyrosine Kinase Signaling
Guoan Zhang et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Mass Spectrometry Detection of Histidine Phosphorylation on NM23-H1
John D. Lapek et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Universal and Confident Phosphorylation Site Localization Using phosphoRS
Thomas Taus et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Comparison of ERLIC-TiO2, HILIC-TiO2, and SCX-TiO2 for Global Phosphoproteomics Approaches
Mostafa Zarei et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Improved Peptide Identification by Targeted Fragmentation Using CID, HCD and ETD on an LTQ-Orbitrap Velos
Christian K. Frese et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Titanium dioxide as chemo-affinity chromatographic sorbent of biomolecular compounds - Applications in acidic modification-specific proteomics
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JOURNAL OF PROTEOMICS (2011)
Confident Phosphorylation Site Localization Using the Mascot Delta Score
Mikhail M. Savitski et al.
MOLECULAR & CELLULAR PROTEOMICS (2011)
Online Nanoflow Multidimensional Fractionation for High Efficiency Phosphopeptide Analysis
Scott B. Ficarro et al.
MOLECULAR & CELLULAR PROTEOMICS (2011)
Simultaneous Analysis of Proteome, Phospho- and Glycoproteome of Rat Kidney Tissue with Electrostatic Repulsion Hydrophilic Interaction Chromatography
Piliang Hao et al.
PLOS ONE (2011)
Catch me if you can: Mass spectrometry-based phosphoproteomics and quantification strategies
Beate Eyrich et al.
PROTEOMICS (2011)
The good, the bad, the ugly: Validating the mass spectrometric analysis of modified peptides
Florian Beck et al.
PROTEOMICS (2011)
iTRAQ protein quantification: A quality-controlled workflow
Julia M. Burkhart et al.
PROTEOMICS (2011)
Assay Development for the Determination of Phosphorylation Stoichiometry Using Multiple Reaction Monitoring Methods with and without Phosphatase Treatment: Application to Breast Cancer Signaling Pathways
Dominik Domanski et al.
ANALYTICAL CHEMISTRY (2010)
The Physiological Relevance of Protein Phosphatase 1 and its Interacting Proteins to Health and Disease
M. Fardilha et al.
CURRENT MEDICINAL CHEMISTRY (2010)
Characterization of O-Phosphohydroxyproline in Rat α-Crystallin A
Axel Kuehlberg et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
Development of Stable Phosphohistidine Analogues
Jung-Min Kee et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2010)
The Generating Function of CID, ETD, and CID/ETD Pairs of Tandem Mass Spectra: Applications to Database Search
Sangtae Kim et al.
MOLECULAR & CELLULAR PROTEOMICS (2010)
Assessment of downstream effectors of BCR/ABL protein tyrosine kinase using combined proteomic approaches
Chia Fang Lee et al.
PROTEOMICS (2010)
Absolute Quantification of Phosphorylation on the Kinase Activation Loop of Cellular Focal Adhesion Kinase by Stable Isotope Dilution Liquid Chromatography/Mass Spectrometry
Eugene Ciccimaro et al.
ANALYTICAL CHEMISTRY (2009)
Lys-N and Trypsin Cover Complementary Parts of the Phosphoproteome in a Refined SCX-Based Approach
Sharon Gauci et al.
ANALYTICAL CHEMISTRY (2009)
Phosphopeptide fragmentation and analysis by mass spectrometry
Paul J. Boersema et al.
JOURNAL OF MASS SPECTROMETRY (2009)
Citrate Boosts the Performance of Phosphopeptide Analysis by UPLC-ESI-MS/MS
Dominic Winter et al.
JOURNAL OF PROTEOME RESEARCH (2009)
Peptide Storage: Are You Getting the Best Return on Your Investment? Defining Optimal Storage Conditions for Proteomics Samples
Alexandra Kraut et al.
JOURNAL OF PROTEOME RESEARCH (2009)
Detection and analysis of protein histidine phosphorylation
Paul G. Besant et al.
MOLECULAR AND CELLULAR BIOCHEMISTRY (2009)
Receptor tyrosine kinase signaling: a view from quantitative proteomics
Joern Dengjel et al.
MOLECULAR BIOSYSTEMS (2009)
Universal sample preparation method for proteome analysis
Jacek R. Wisniewski et al.
NATURE METHODS (2009)
In vivo phosphorylation sites of barley tonoplast proteins identified by a phosphoproteomic approach
Anne Endler et al.
PROTEOMICS (2009)
McsB Is a Protein Arginine Kinase That Phosphorylates and Inhibits the Heat-Shock Regulator CtsR
Jakob Fuhrmann et al.
SCIENCE (2009)
Evaluation of Gas-Phase Rearrangement and Competing Fragmentation Reactions on Protein Phosphorylation Site Assignment Using Collision Induced Dissociation-MS/MS and MS3
Amanda M. Palumbo et al.
ANALYTICAL CHEMISTRY (2008)
Electrostatic repulsion hydrophilic interaction chromatography for isocratic separation of charged solutes and selective isolation of phosphopeptides
Andrew J. Alpert
ANALYTICAL CHEMISTRY (2008)
A Comparative Study of Electrostatic Repulsion-Hydrophilic Interaction Chromatography (ERLIC) versus SCX-IMAC-Based Methods for Phosphopeptide Isolation/Enrichment
Chee Sian Gan et al.
JOURNAL OF PROTEOME RESEARCH (2008)
Highly robust, automated, and sensitive on line TiO2-based phosphoproteomics applied to study endogenous phosphorylation in Drosophila melanogaster
Martijn W. H. Pinkse et al.
JOURNAL OF PROTEOME RESEARCH (2008)
Hydrophilic interaction chromatography reduces the complexity of the phosphoproteome and improves global phosphopeptide isolation and detection
Dean E. McNulty et al.
MOLECULAR & CELLULAR PROTEOMICS (2008)
Decision tree-driven tandem mass spectrometry for shotgun proteomics
Danielle L. Swaney et al.
NATURE METHODS (2008)
SIMAC (sequential elution from IMAC), a phosphoproteomics strategy for the rapid separation of monophosphorylated from multiply phosphorylated peptides
Tine E. Thingholm et al.
MOLECULAR & CELLULAR PROTEOMICS (2008)
Quantitative proteomic analysis of protein complexes
Delphine Pflieger et al.
MOLECULAR & CELLULAR PROTEOMICS (2008)
Global profiling of phosphopeptides by titania affinity enrichment
Jiang Wu et al.
JOURNAL OF PROTEOME RESEARCH (2007)
Performance characteristics of electron transfer dissociation mass spectrometry
David M. Good et al.
MOLECULAR & CELLULAR PROTEOMICS (2007)
Analysis of histidine phosphorylation using tandem MS and ion - Electron reactions
Anne J. Kleinnijenhuis et al.
ANALYTICAL CHEMISTRY (2007)
Quantitative proteomic assessment of very early cellular signaling events
Joern Dengjel et al.
NATURE BIOTECHNOLOGY (2007)
Reproducible isolation of distinct, overlapping segments of the phosphoproteome
Bernd Bodenmiller et al.
NATURE METHODS (2007)
Large-scale phosphorylation analysis of mouse liver
Judit Villen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Focus on phosphohistidine
P. V. Attwood et al.
AMINO ACIDS (2007)
Histidine phosphorylation of the potassium channel KCa3.1 by nucleoside diphosphate kinase B is required for activation of KCa3.1 and CD4 T cells
Shekhar Srivastava et al.
MOLECULAR CELL (2006)
Global, in vivo, and site-specific phosphorylation dynamics in signaling networks
Jesper V. Olsen et al.
CELL (2006)
A probability-based approach for high-throughput protein phosphorylation analysis and site localization
Sean A. Beausoleil et al.
NATURE BIOTECHNOLOGY (2006)
Highly selective enrichment of phosphorylated peptides using titanium dioxide
Tine E. Thingholm et al.
NATURE PROTOCOLS (2006)
Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns
MR Larsen et al.
MOLECULAR & CELLULAR PROTEOMICS (2005)
Sample preparation and digestion for proteomic analyses using spin filters
LL Manza et al.
PROTEOMICS (2005)
Immunoaffinity profiling of tyrosine phosphorylation in cancer cells
J Rush et al.
NATURE BIOTECHNOLOGY (2005)
An isotope labeling strategy for quantifying the degree of phosphorylation at multiple sites in proteins
AD Hegeman et al.
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2004)
Chemo-affinity of titania for the column-switching HPLC analysis of phosphopeptides
A Sano et al.
ANALYTICAL SCIENCES (2004)
Phosphopeptide-selective column-switching RP-HPLC with a titania precolumn
I Kuroda et al.
ANALYTICAL SCIENCES (2004)
Large-scale characterization of HeLa cell nuclear phosphoproteins
SA Beausoleil et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Selective isolation at the femtomole level of phosphopeptides from proteolytic digests using 2D-nanoLC-ESI-MS/MS and titanium oxide precolumns
MWH Pinkse et al.
ANALYTICAL CHEMISTRY (2004)
Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry
LM Brill et al.
ANALYTICAL CHEMISTRY (2004)
Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS
SA Gerber et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Selective extraction and characterization of a histidine-phosphorylated peptide using immobilized copper(II) ion affinity chromatography and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
S Napper et al.
ANALYTICAL CHEMISTRY (2003)
Activation of heterotrimeric G proteins by a high energy phosphate transfer via nucleoside diphosphate kinase (NDPK) B and Gβ subunits -: Complex formation of NDPK B with Gβγ dimers and phosphorylation of His-266 in Gβ
F Cuello et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
Detection of histidine kinases via a filter-based assay and reverse-phase thin-layer chromatographic phosphoamino acid analysis
EL Tan et al.
ANALYTICAL BIOCHEMISTRY (2003)
Identification and characterization of a mammalian 14-kDa phosphohistidine phosphatase
P Ek et al.
EUROPEAN JOURNAL OF BIOCHEMISTRY (2002)
Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae
SB Ficarro et al.
NATURE BIOTECHNOLOGY (2002)
Histidine to aspartate phosphotransferase activity of nm23 proteins: phosphorylation of aldolase C on Asp-319
PD Wagner et al.
BIOCHEMICAL JOURNAL (2000)
Detection of a mammalian histone H4 kinase that has yeast histidine kinase-like enzymic activity
PG Besant et al.
INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY (2000)