期刊
BRIEFINGS IN FUNCTIONAL GENOMICS
卷 13, 期 4, 页码 296-307出版社
OXFORD UNIV PRESS
DOI: 10.1093/bfgp/elu016
关键词
structural variations (SVs); next-generation sequencing (NGS); copy number variations (CNVs); presence and absence variations (PAVs); inversions; translocations
资金
- United States Agency for International Development (USAID)
- Department of Science and Technology (DST), Govt. of India
- Australian Research Council [LP0882095, LP0883462, LP110100200]
- Australian Research Council [LP110100200, LP0883462] Funding Source: Australian Research Council
Differences between plant genomes range from single nucleotide polymorphisms to large-scale duplications, deletions and rearrangements. The large polymorphisms are termed structural variants (SVs). SVs have received significant attention in human genetics and were found to be responsible for various chronic diseases. However, little effort has been directed towards understanding the role of SVs in plants. Many recent advances in plant genetics have resulted from improvements in high-resolution technologies for measuring SVs, including microarray-based techniques, and more recently, high-throughput DNA sequencing. In this review we describe recent reports of SV in plants and describe the genomic technologies currently used to measure these SVs.
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