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GENES & DEVELOPMENT (2008)
A cryptic unstable transcript mediates transcriptional trans-silencing of the Ty1 retrotransposon in S. cerevisiae
Julia Berretta et al.
GENES & DEVELOPMENT (2008)
Primary microRNA transcript retention at sites of transcription leads to enhanced microRNA production
Jan M. Pawlicki et al.
JOURNAL OF CELL BIOLOGY (2008)
Human Alu RNA is a modular transacting repressor of mRNA transcription during heat shock
Peter D. Mariner et al.
MOLECULAR CELL (2008)
Noncoding RNA in development
Paulo P. Amaral et al.
MAMMALIAN GENOME (2008)
Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA
Wenqiang Yu et al.
NATURE (2008)
Induced ncRNAs allosterically modify RNA-binding proteins in cis to inhibit transcription
Xiangting Wang et al.
NATURE (2008)
Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
Brian T. Wilhelm et al.
NATURE (2008)
p53 mrNA controls p53 activity by managing Mdm2 functions
Marco M. Candeias et al.
NATURE CELL BIOLOGY (2008)
Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of β-secretase
Mohammad Ali Faghihi et al.
NATURE MEDICINE (2008)
New roles for large and small viral RNAs in evading host defences
Christopher S. Sullivan
NATURE REVIEWS GENETICS (2008)
Tuning gene expression to changing environments:: from rapid responses to evolutionary adaptation
Luis Lopez-Maury et al.
NATURE REVIEWS GENETICS (2008)
Small Toxic Proteins and the Antisense RNAs That Repress Them
Elizabeth M. Fozo et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2008)
SnoRNA Snord116 (Pwcr1/MBII-85) Deletion Causes Growth Deficiency and Hyperphagia in Mice
Feng Ding et al.
PLOS ONE (2008)
Specific expression of long noncoding RNAs in the mouse brain
Tim R. Mercer et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
An Epigenetic Role for Maternally Inherited piRNAs in Transposon Silencing
Julius Brennecke et al.
SCIENCE (2008)
The Air Noncoding RNA Epigenetically Silences Transcription by Targeting G9a to Chromatin
Takashi Nagano et al.
SCIENCE (2008)
Small RNA-Directed epigenetic natural variation in Arabidopsis thaliana
Jixian Zhai et al.
PLOS GENETICS (2008)
Transcription of Satellite III non-coding RNAs is a general stress response in human cells
Rut Valgardsdottir et al.
NUCLEIC ACIDS RESEARCH (2008)
A novel class of bacteria-induced small RNAs in Arabidopsis
Surekha Katiyar-Agarwal et al.
GENES & DEVELOPMENT (2007)
The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race
Alexei A. Aravin et al.
SCIENCE (2007)
Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion
Flore Winter et al.
NUCLEIC ACIDS RESEARCH (2007)
Noncoding transcription controls downstream promoters to regulate T-cell receptor α recombination
Iratxe Abarrategui et al.
EMBO JOURNAL (2007)
Antisense transcription in the human cytomegalovirus transcriptome
Guojuan Zhang et al.
JOURNAL OF VIROLOGY (2007)
Adenovirus virus-associated RNAII-Derived small RNAs are efficiently incorporated into the RNA-Induced silencing complex and associate with polyribosomes
Ning Xu et al.
JOURNAL OF VIROLOGY (2007)
The H19 Non-Coding RNA Is Essential for Human Tumor Growth
Imad J. Matouk et al.
PLOS ONE (2007)
A cyanobacterial non-coding RNA, Yfr1, is required for growth under multiple stress conditions
Takahiro Nakamura et al.
PLANT AND CELL PHYSIOLOGY (2007)
Activation of p53 by MEG3 non-coding RNA
Yunli Zhou et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
Antiviral immunity directed by small RNAs
Shou-Wei Ding et al.
CELL (2007)
Bsr, a nuclear-retained RNA with monoallelic expression
Helene Royo et al.
MOLECULAR BIOLOGY OF THE CELL (2007)
Target mimicry provides a new mechanism for regulation of microRNA activity
Jose Manuel Franco-Zorrilla et al.
NATURE GENETICS (2007)
Host immune system gene targeting by a viral miRNA
Noam Stern-Ginossar et al.
SCIENCE (2007)
Functional demarcation of active and silent chromatin domains in human HOX loci by Noncoding RNAs
John L. Rinn et al.
CELL (2007)
Complex I binding by a virally encoded RNA regulates mitochondria-induced cell death
Matthew B. Reeves et al.
SCIENCE (2007)
Activity of the β-myosin heavy chain antisense promoter responds to diabetes and hypothyroidism
Julia Giger et al.
AMERICAN JOURNAL OF PHYSIOLOGY-HEART AND CIRCULATORY PHYSIOLOGY (2007)
The dsRNA protein kinase PKR:: Virus and cell control
M. A. Garcia et al.
BIOCHIMIE (2007)
Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs
Jasmina Ponjavic et al.
GENOME RESEARCH (2007)
Subtractive hybridization identifies novel differentially expressed ncRNA species in EBV-infected human B cells
Jan Mrazek et al.
NUCLEIC ACIDS RESEARCH (2007)
Magnaporthe grisea infection triggers RNA variation and antisense transcript expression in rice
Malali Gowda et al.
PLANT PHYSIOLOGY (2007)
Heat shock genes - integrating cell survival and death
Richa Arya et al.
JOURNAL OF BIOSCIENCES (2007)
CRISPR provides acquired resistance against viruses in prokaryotes
Rodolphe Barrangou et al.
SCIENCE (2007)
A novel non-protein-coding infection-specific gene family is clustered throughout the genome of Phytophthora infestans
Anna O. Avrova et al.
MICROBIOLOGY-SGM (2007)
Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript
Igor Martianov et al.
NATURE (2007)
Androgen responsive intronic non-coding RNAs
Rodrigo Louro et al.
BMC BIOLOGY (2007)
The relationship between non-protein-coding DNA and eukaryotic complexity
Ryan J. Taft et al.
BIOESSAYS (2007)
Transposable elements and the epigenetic regulation of the genome
R. Keith Slotkin et al.
NATURE REVIEWS GENETICS (2007)
Induction of drug resistance and transformation in human cancer cells by the noncoding RNA CUDR
Wing Pui Tsang et al.
RNA (2007)
A pathogen-inducible endogenous siRNA in plant immunity
Surekha Katiyar-Agarwal et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Human sat III and Drosophila hsrω transcripts:: a common paradigm for regulation of nuclear RNA processing in stressed cells
Caroline Jolly et al.
NUCLEIC ACIDS RESEARCH (2006)
Identification and characterization of a virus-inducible non-coding RNA in mouse brain
Sougata Saha et al.
JOURNAL OF GENERAL VIROLOGY (2006)
Molecular basis for temperature sensing by an RNA thermometer
Saheli Chowdhury et al.
EMBO JOURNAL (2006)
Regulation of antisense RNA expression during cardiac MHC gene switching in response to pressure overload
F Haddad et al.
AMERICAN JOURNAL OF PHYSIOLOGY-HEART AND CIRCULATORY PHYSIOLOGY (2006)
Uncoupling of RNA binding and PKR kinase activation by viral inhibitor RNAs
Sean A. McKenna et al.
JOURNAL OF MOLECULAR BIOLOGY (2006)
Intergenic transcripts regulate the epigenetic state of rRNA genes
Christine Mayer et al.
MOLECULAR CELL (2006)
Characterization of 43 non-protein-coding mRNA genes in Arabidopsis, including the MIR162a-derived transcripts
J Hirsch et al.
PLANT PHYSIOLOGY (2006)
A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action
Kira S. Makarova et al.
BIOLOGY DIRECT (2006)
Sequence-specific interference by small RNAs derived from adenovirus VAI RNA
M Sano et al.
FEBS LETTERS (2006)
Regulation of apoptosis by a prostate-specific and prostate cancer-associated noncoding gene, PCGEM1
XQ Fu et al.
DNA AND CELL BIOLOGY (2006)
Dictyostelium transcriptional host cell response upon infection with Legionella
P Farbrother et al.
CELLULAR MICROBIOLOGY (2006)
Epstein-Barr virus: Inhibition of apoptosis as a mechanism of cell transformation
MJ Clemens
INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY (2006)
Rapid evolution of noncoding RNAs: lack of conservation does not mean lack of function
KC Pang et al.
TRENDS IN GENETICS (2006)
Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome
T Ravasi et al.
GENOME RESEARCH (2006)
MicroRNAs: expression, avoidance and subversion by vertebrate viruses
Peter Sarnow et al.
NATURE REVIEWS MICROBIOLOGY (2006)
Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis
O Borsani et al.
CELL (2005)
Identification and expression analysis of putative mRNA-like non-coding RNA in Drosophila
S Inagaki et al.
GENES TO CELLS (2005)
Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome
S Washietl et al.
NATURE BIOTECHNOLOGY (2005)
MicroRNA functions in animal development and human disease
I Alvarez-Garcia et al.
DEVELOPMENT (2005)
Egulating gene expression through RNA nuclear retention
KV Prasanth et al.
CELL (2005)
Epstein-Barr virus-encoded poly(A)- RNA confers resistance to apoptosis mediated through Fas by blocking the PKR pathway in human epithelial intestine 407 cells
A Nanbo et al.
JOURNAL OF VIROLOGY (2005)
The transcriptional landscape of the mammalian genome
P Carninci et al.
SCIENCE (2005)
Modulation of hepatitis C virus RNA abundance by a liver-specific microRNA
CL Jopling et al.
SCIENCE (2005)
Suppression of RNA interference by adenovirus virus-associated RNA
MG Andersson et al.
JOURNAL OF VIROLOGY (2005)
Identification and characterization of a novel, psoriasis susceptibility-related noncoding RNA gene, PRINS
E Sonkoly et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
APeg3, a novel paternally expressed gene 3 antisense RNA transcript specifically expressed in vasopressinergic magnocellular neurons in the rat supraoptic nucleus
E Glasgow et al.
MOLECULAR BRAIN RESEARCH (2005)
Identification and characterization of a novel gene Saf transcribed from the opposite strand of Fas
MD Yan et al.
HUMAN MOLECULAR GENETICS (2005)
Structural and functional characterization of noncoding repetitive RNAs transcribed in stressed human cells
R Valgardsdottir et al.
MOLECULAR BIOLOGY OF THE CELL (2005)
Stress-induced variation in evolution: from behavioural plasticity to genetic assimilation
AV Badyaev
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2005)
The nucleolus as a stress sensor: JNK2 inactivates the transcription factor TIF-IA and down-regulates rRNA synthesis
C Mayer et al.
GENES & DEVELOPMENT (2005)
Prolonged hypoxia differentially regulates hypoxia-inducible factor (HIF)-1α and HIF-2α expression in lung epithelial cells -: Implication of natural antisense HIF-1α
T Uchida et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs
S Cawley et al.
CELL (2004)
Transcriptional activation of a constitutive heterochromatic domain of the human genome in response to heat shock
N Rizzi et al.
MOLECULAR BIOLOGY OF THE CELL (2004)
Elevated expression of PCGEM1, a prostate-specific gene with cell growth-promoting function, is associated with high-risk prostate cancer patients
G Petrovics et al.
ONCOGENE (2004)
Stress-induced transcription of satellite III repeats
C Jolly et al.
JOURNAL OF CELL BIOLOGY (2004)
Natural antisense transcripts of HIF-1α are conserved in rodents
F Rossignol et al.
GENE (2004)
A key role for stress-induced satellite III transcripts in the relocalization of splicing factors into nuclear stress granules
A Metz et al.
JOURNAL OF CELL SCIENCE (2004)
The SINE-encoded mouse B2 RNA represses mRNA transcription in response to heat shock
TA Allen et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2004)
Medial prefrontal cortex is involved in spatial temporal order memory but not spatial recognition memory in tests relying on spontaneous exploration in rats
DK Hannesson et al.
BEHAVIOURAL BRAIN RESEARCH (2004)
Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis
R Sunkar et al.
PLANT CELL (2004)
Adenovirus VA1 noncoding RNA can inhibit small interfering RNA and microRNA biogenesis
SH Lu et al.
JOURNAL OF VIROLOGY (2004)
Nuclear stress bodies: a heterochromatin affair?
G Biamonti
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2004)
Disruption of the nucleolus mediates stabilization of p53 in response to DNA damage and other stresses
CP Rubbi et al.
EMBO JOURNAL (2003)
Toxin-antitoxin loci as stress-response-elements: ChpAK/MazF and ChpBK cleave translated RNAs and are counteracted by tmRNA
SK Christensen et al.
JOURNAL OF MOLECULAR BIOLOGY (2003)
Transcription of antisense RNA leading to gene silencing and methylation as a novel cause of human genetic disease
C Tufarelli et al.
NATURE GENETICS (2003)
Tmevpg1, a candidate gene for the control of Theiler's virus persistence, could be implicated in the regulation of gamma interferon
S Vigneau et al.
JOURNAL OF VIROLOGY (2003)
aHIF but not HIF-1 alpha transcript is a poor prognostic marker in human breast cancer
A Cayre et al.
BREAST CANCER RESEARCH (2003)
Activation and function of cyclin T-Cdk9 (positive transcription elongation factor-b) in cardiac muscle-cell hypertrophy
M Sano et al.
NATURE MEDICINE (2002)
Possible physiological role of H19 RNA
S Ayesh et al.
MOLECULAR CARCINOGENESIS (2002)
The 7SK small nuclear RNA inhibits the CDK9/cyclin T1 kinase to control transcription
ZY Yang et al.
NATURE (2001)
7SK small nuclear RNA binds to and inhibits the activity of CDK9/cyclin T complexes
VT Nguyen et al.
NATURE (2001)
Male sterility associated with overexpression of the noncoding hsrω gene in cyst cells of testis of Drosophila melanogaster
TK Rajendra et al.
JOURNAL OF GENETICS (2001)
A novel brain-specific box C/D small nucleolar RNA processed from tandemly repeated introns of a noncoding RNA gene in rats
J Cavaillé et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2001)
Characterization of the genomic Xist locus in rodents reveals conservation of overall gene structure and tandem repeats but rapid evolution of unique sequence
TB Nesterova et al.
GENOME RESEARCH (2001)
Transgenerational consequences of plant responses to herbivory: An adaptive maternal effect?
AA Agrawal
AMERICAN NATURALIST (2001)
Identification of urocortin mRNA antisense transcripts in rat tissue
MX Shi et al.
BRAIN RESEARCH BULLETIN (2000)
Hypoxia-inducible factor-1 mediates the biological effects of oxygen on human trophoblast differentiation through TGFβ3
I Caniggia et al.
JOURNAL OF CLINICAL INVESTIGATION (2000)
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