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POODLE-S: web application for predicting protein disorder by using physicochemical features and reduced amino acid set of a position-specific scoring matrix
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POODLE-L: a two-level SVM prediction system for reliably predicting long disordered regions
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Computer-assisted protein domain boundary prediction using the Dom-Pred server
Kevin Bryson et al.
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Kana Shimizu et al.
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ISIS: interaction sites identified from sequence
Yanay Ofran et al.
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DisProt: the database of disordered proteins
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Francois Ferron et al.
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DISULFIND: a disulfide bonding state and cysteine connectivity prediction server
Alessio Ceroni et al.
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Chung-Tsai Su et al.
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Jiangang Liu et al.
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Calmodulin signaling: Analysis and prediction of a disorder-dependent molecular recognition
P Radivojac et al.
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Length-dependent prediction of protein intrinsic disorder
Kang Peng et al.
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Assessing protein disorder and induced folding
V Receveur-Brechot et al.
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Flexible nets - The roles of intrinsic disorder in protein interaction networks
AK Dunker et al.
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Site-specific dimensions across a highly denatured protein; a single molecule study
ER McCarney et al.
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RONN: the bio-basis function neural network technique applied to the detection of natively disordered regions in proteins
ZR Yang et al.
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FoldIndex©:: a simple tool to predict whether a given protein sequence is intrinsically unfolded
J Prilusky et al.
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IUPred:: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content
Z Dosztányi et al.
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P Tompa
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Z Dosztányi et al.
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HJ Dyson et al.
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Showing your ID: intrinsic disorder as an ID for recognition, regulation and cell signaling
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JJ Ward et al.
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The importance of intrinsic disorder for protein phosphorylation
LM Iakoucheva et al.
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Accurate prediction of solvent accessibility using neural networks-based regression
R Adamczak et al.
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K Gunasekaran et al.
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TM or not TM: transmembrane protein prediction with low false positive rate using DAS-TMfilter
M Cserzo et al.
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Interaction of calpastatin with calpain: a review
A Wendt et al.
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SJ Demarest et al.
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Combining prediction, computation and experiment for the characterization of protein disorder
C Bracken et al.
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Preformed structural elements feature in partner recognition by intrinsically unstructured proteins
M Fuxreiter et al.
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GlobPlot: exploring protein sequences for globularity and disorder
R Linding et al.
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Protein disorder prediction: Implications for structural proteomics
R Linding et al.
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Intrinsic disorder in cell-signaling and cancer-associated proteins
LM Iakoucheva et al.
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P Tompa
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Evolutionary rate heterogeneity in proteins with long disordered regions
CJ Brown et al.
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HJ Dyson et al.
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Mutual synergistic folding in recruitment of CBP/p300 by p160 nuclear receptor coactivators
SJ Demarest et al.
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Structure-function analysis of the heat shock factor-binding protein reveals a protein composed solely of a highly conserved and dynamic coiled-coil trimerization domain
LJ Tai et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2002)
Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements
AA Schäffer et al.
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AK Dunker et al.
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The Protein Data Bank
HM Berman et al.
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