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Ka Yee Yeung et al.
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Gareth M. James et al.
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Eric E. Schadt et al.
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Alexander J. Stewart et al.
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Su-In Lee et al.
PLOS GENETICS (2009)
Seeded Bayesian Networks: Constructing genetic networks from microarray data
Amira Djebbari et al.
BMC SYSTEMS BIOLOGY (2008)
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Jun Zhu et al.
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Phenotypic engineering by reprogramming gene transcription using novel artificial transcription factors in Escherichia coli
Ju Young Lee et al.
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How many imputations are really needed? - Some practical clarifications of multiple imputation theory
John W. Graham et al.
PREVENTION SCIENCE (2007)
Reconstructing gene-regulatory networks from time series, knock-out data, and prior knowledge
Florian Geier et al.
BMC SYSTEMS BIOLOGY (2007)
NCBI GEO: mining tens of millions of expression profiles - database and tools update
Tanya Barrett et al.
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Identifying regulatory mechanisms using individual variation reveals key role for chromatin modification
Su-In Lee et al.
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M Bansal et al.
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Least absolute regression network analysis of the murine osteoblast differentiation network
EP van Someren et al.
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The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae
Miguel C. Teixeira et al.
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The Inferelator: an algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo
Richard Bonneau et al.
GENOME BIOLOGY (2006)
An integrative genomics approach to infer causal associations between gene expression and disease
EE Schadt et al.
NATURE GENETICS (2005)
Bayesian model averaging: development of an improved multi-class, gene selection and classification tool for microarray data
KY Yeung et al.
BIOINFORMATICS (2005)
Dynamic network reconstruction from gene expression data applied to immune response during bacterial infection
R Guthke et al.
BIOINFORMATICS (2005)
Chemogenomic profiling on a genomewide scale using reverse-engineered gene networks
D di Bernardo et al.
NATURE BIOTECHNOLOGY (2005)
The landscape of genetic complexity across 5,700 gene expression traits in yeast
RB Brem et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
A new dynamic Bayesian network (DBN) approach for identifying gene regulatory networks from time course microarray data
M Zou et al.
BIOINFORMATICS (2005)
Applied bioinformatics for the identification of regulatory elements
WW Wasserman et al.
NATURE REVIEWS GENETICS (2004)
Inferring cellular networks using probabilistic graphical models
N Friedman
SCIENCE (2004)
Transcriptional regulatory code of a eukaryotic genome
CT Harbison et al.
NATURE (2004)
Advances to Bayesian network inference for generating causal networks from observational biological data
J Yu et al.
BIOINFORMATICS (2004)
An integrative genomics approach to the reconstruction of gene networks in segregating populations
J Zhu et al.
CYTOGENETIC AND GENOME RESEARCH (2004)
Sensitivity and specificity of inferring genetic regulatory interactions from microarray experiments with dynamic Bayesian networks
D Husmeier
BIOINFORMATICS (2003)
Inferring genetic networks and identifying compound mode of action via expression profiling
TS Gardner et al.
SCIENCE (2003)
Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data
E Segal et al.
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Reverse engineering gene networks:: Integrating genetic perturbations with dynamical modeling
J Tegnér et al.
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Exploration, normalization, and summaries of high density oligonucleotide array probe level data
RA Irizarry et al.
BIOSTATISTICS (2003)
ArrayExpress - a public repository for microarray gene expression data at the EBI
A Brazma et al.
NUCLEIC ACIDS RESEARCH (2003)
The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003
B Boeckmann et al.
NUCLEIC ACIDS RESEARCH (2003)
Network motifs in the transcriptional regulation network of Escherichia coli
SS Shen-Orr et al.
NATURE GENETICS (2002)
Topological and causal structure of the yeast transcriptional regulatory network
N Guelzim et al.
NATURE GENETICS (2002)
Reverse engineering gene networks using singular value decomposition and robust regression
MKS Yeung et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
MIPS: a database for genomes and protein sequences
HW Mewes et al.
NUCLEIC ACIDS RESEARCH (2002)
A genomic regulatory network for development
EH Davidson et al.
SCIENCE (2002)
Modeling and simulation of genetic regulatory systems: A literature review
H De Jong
JOURNAL OF COMPUTATIONAL BIOLOGY (2002)
Functional discovery via a compendium of expression profiles
TR Hughes et al.
CELL (2000)
Using Bayesian networks to analyze expression data
N Friedman et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2000)
The Yeast Proteome Database (YPD) and Caenorhabditis elegans Proteome Database (WormPD): comprehensive resources for the organization and comparison of model organism protein information
MC Costanzo et al.
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