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John C. Marioni et al.
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Tony Kwan et al.
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Qun Pan et al.
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Ali Mortazavi et al.
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Brian C. Thomas et al.
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BB Wang et al.
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JG Li et al.
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JY Park et al.
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E Quevillon et al.
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S Maere et al.
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I Yanai et al.
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