期刊
BMC GENOMICS
卷 10, 期 -, 页码 -出版社
BMC
DOI: 10.1186/1471-2164-10-5
关键词
-
资金
- AR and J Leenards Foundation
- Swiss National Science Foundation
- Herbette Foundation
- University of Lausanne
- Swiss State Secretariat for Education and Research
Background: Fourmidable is an infrastructure to curate and share the emerging genetic, molecular, and functional genomic data and protocols for ants. Description: The Fourmidable assembly pipeline groups nucleotide sequences into clusters before independently assembling each cluster. Subsequently, assembled sequences are annotated via Interproscan and BLAST against general and insect-specific databases. Gene-specific information can be retrieved using gene identifiers, searching for similar sequences or browsing through inferred Gene Ontology annotations. The database will readily scale as ultra-high throughput sequence data and sequences from additional species become available. Conclusion: Fourmidable currently houses EST data from two ant species and microarray gene expression data for one of these. Fourmidable is publicly available at http://fourmidable.unil.ch
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