4.4 Article

A phylogenomic analysis of Escherichia coli/Shigella group: implications of genomic features associated with pathogenicity and ecological adaptation

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

Ioanna Pagani et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biochemical Research Methods

Mugsy: fast multiple alignment of closely related whole genomes

Samuel V. Angiuoli et al.

BIOINFORMATICS (2011)

Article Microbiology

Core and Panmetabolism in Escherichia coli

Gilles Vieira et al.

JOURNAL OF BACTERIOLOGY (2011)

Article Multidisciplinary Sciences

Whole-genome phylogeny of Escherichia coli/Shigella group by feature frequency profiles (FFPs)

Gregory E. Sims et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Review Microbiology

The population genetics of commensal Escherichia coli

Olivier Tenaillon et al.

NATURE REVIEWS MICROBIOLOGY (2010)

Review Ecology

Comparison of 61 Sequenced Escherichia coli Genomes

Oksana Lukjancenko et al.

MICROBIAL ECOLOGY (2010)

Article Microbiology

The Type III Secretion Effector NleE Inhibits NF-kappa B Activation

Chen Nadler et al.

PLOS PATHOGENS (2010)

Review Biochemistry & Molecular Biology

The bacterial LexA transcriptional repressor

M. Butala et al.

CELLULAR AND MOLECULAR LIFE SCIENCES (2009)

Review Biochemistry & Molecular Biology

Operons

Anne E. Osbourn et al.

CELLULAR AND MOLECULAR LIFE SCIENCES (2009)

Review Biochemistry & Molecular Biology

Evolution of genome architecture

Eugene V. Koonin

INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY (2009)

Article Biology

Gene and genome trees conflict at many levels

Leanne S. Haggerty et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2009)

Article Multidisciplinary Sciences

Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli

Yoshitoshi Ogura et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Mathematical & Computational Biology

MicroScope: a platform for microbial genome annotation and comparative genomics

D. Vallenet et al.

DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2009)

Article Biochemistry & Molecular Biology

Extraintestinal virulence is a coincidental by-product of commensalism in B2 phylogenetic group Escherichia coli strains

Tony Le Gall et al.

MOLECULAR BIOLOGY AND EVOLUTION (2007)

Article Genetics & Heredity

The life-cycle of operons

Morgan N. Price et al.

PLOS GENETICS (2006)

Review Microbiology

Pathogenic Escherichia coli

JB Kaper et al.

NATURE REVIEWS MICROBIOLOGY (2004)

Article Biochemistry & Molecular Biology

Mauve: Multiple alignment of conserved genomic sequence with rearrangements

ACE Darling et al.

GENOME RESEARCH (2004)

Article Biochemistry & Molecular Biology

A specific genetic background is required for acquisition and expression of virulence factors in Escherichia coli

P Escobar-Páramo et al.

MOLECULAR BIOLOGY AND EVOLUTION (2004)

Article Biochemistry & Molecular Biology

The evolutionary history of shigella and enteroinvasive Escherichia coli revised

P Escobar-Páramo et al.

JOURNAL OF MOLECULAR EVOLUTION (2003)

Article Multidisciplinary Sciences

Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics

GM Pupo et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)

Review Multidisciplinary Sciences

Lateral gene transfer and the nature of bacterial innovation

H Ochman et al.

NATURE (2000)