4.4 Review

Assigning biological functions to rice genes by genome annotation, expression analysis and mutagenesis

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Natural and artificial mutants as valuable resources for functional genomics and molecular breeding

Shu-Ye Jiang et al.

International Journal of Biological Sciences (2012)

Review Plant Sciences

Genomics and Bioinformatics Resources for Crop Improvement

Keiichi Mochida et al.

PLANT AND CELL PHYSIOLOGY (2010)

Review Plant Sciences

Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond

Ryan Lister et al.

CURRENT OPINION IN PLANT BIOLOGY (2009)

Article Genetics & Heredity

Natural variation at the DEP1 locus enhances grain yield in rice

Xianzhong Huang et al.

NATURE GENETICS (2009)

Review Plant Sciences

Phenome Analysis in Plant Species Using Loss-of-Function and Gain-of-Function Mutants

Takashi Kuromori et al.

PLANT AND CELL PHYSIOLOGY (2009)

Editorial Material Plant Sciences

Mutant Resources in Rice for Functional Genomics of the Grasses

Arjun Krishnan et al.

PLANT PHYSIOLOGY (2009)

Article Genetics & Heredity

Next-Generation DNA Sequencing Methods

Elaine R. Mardis

Annual Review of Genomics and Human Genetics (2008)

Article Biochemical Research Methods

Identification and correction of abnormal, incomplete and mispredicted proteins in public databases

Alinda Nagy et al.

BMC BIOINFORMATICS (2008)

Article Plant Sciences

RICD: A rice indica cDNA database resource for rice functional genomics

Tingting Lu et al.

BMC PLANT BIOLOGY (2008)

Article Biochemistry & Molecular Biology

Rice 2020: A call for an international coordinated effort in rice functional Genomics

Qifa Zhang et al.

MOLECULAR PLANT (2008)

Article Genetics & Heredity

Deletion in a gene associated with grain size increased yields during rice domestication

Ayahiko Shomura et al.

NATURE GENETICS (2008)

Article Biochemical Research Methods

Mapping and quantifying mammalian transcriptomes by RNA-Seq

Ali Mortazavi et al.

NATURE METHODS (2008)

Article Biochemistry & Molecular Biology

Large-scale characterization of Tos17 insertion sites in a rice T-DNA mutant library

Pietro Piffanelli et al.

PLANT MOLECULAR BIOLOGY (2007)

Article Biochemistry & Molecular Biology

Analysis of gene-trap Ds rice populations in Korea

Sung Han Park et al.

PLANT MOLECULAR BIOLOGY (2007)

Article Biochemistry & Molecular Biology

Ds insertion mutagenesis as an efficient tool to produce diverse variations for rice breeding

Shu-Ye Jiang et al.

PLANT MOLECULAR BIOLOGY (2007)

Article Biochemistry & Molecular Biology

A rice phenomics study-phenotype scoring and seed propagation of a T-DNA insertion-induced rice mutant population

Chyr-Guan Chern et al.

PLANT MOLECULAR BIOLOGY (2007)

Review Multidisciplinary Sciences

Strategies for developing green super rice

Qifa Zhang

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Developmental Biology

ORYZA SATIVA MYOSIN XI B controls pollen development by photoperiod-sensitive protein localizations

Shu-Ye Jiang et al.

DEVELOPMENTAL BIOLOGY (2007)

Article Biotechnology & Applied Microbiology

An expression atlas of rice mRNAs and small RNAs

Kan Nobuta et al.

NATURE BIOTECHNOLOGY (2007)

Article Biochemistry & Molecular Biology

NCBI GEO: mining tens of millions of expression profiles - database and tools update

Tanya Barrett et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biochemistry & Molecular Biology

Chemical- and irradiation-induced mutants of indica rice IR64 for forward and reverse genetics

JL Wu et al.

PLANT MOLECULAR BIOLOGY (2005)

Article Biochemistry & Molecular Biology

EU-OSTID:: A collection of transposon insertional mutants for functional genomics in rice

LJG van Enckevort et al.

PLANT MOLECULAR BIOLOGY (2005)

Article Multidisciplinary Sciences

The map-based sequence of the rice genome

T Matsumoto et al.

NATURE (2005)

Article Multidisciplinary Sciences

Cytokinin oxidase regulates rice grain production

M Ashikari et al.

SCIENCE (2005)

Article Plant Sciences

The institute for genomic research Osa1 rice genome annotation database

QP Yuan et al.

PLANT PHYSIOLOGY (2005)

Article Biochemical Research Methods

GMAP: a genomic mapping and alignment program for mRNA and EST sequences

TD Wu et al.

BIOINFORMATICS (2005)

Article Biochemistry & Molecular Biology

The Genomes of Oryza sativa:: A history of duplications

J Yu et al.

PLOS BIOLOGY (2005)

Article Biochemical Research Methods

A practical vector for efficient knockdown of gene expression in rice (Oryza sativa L.)

M Wang et al.

PLANT MOLECULAR BIOLOGY REPORTER (2004)

Article Plant Sciences

Simple RNAi vectors for stable and transient suppression of gene function in rice

D Miki et al.

PLANT AND CELL PHYSIOLOGY (2004)

Article Agronomy

Transpositional behaviour of an Ac/Ds system for reverse genetics in rice

R Greco et al.

THEORETICAL AND APPLIED GENETICS (2003)

Article Multidisciplinary Sciences

Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice

S Kikuchi et al.

SCIENCE (2003)

Article Plant Sciences

A chemical-regulated inducible RNAi system in plants

HS Guo et al.

PLANT JOURNAL (2003)

Article Multidisciplinary Sciences

Control of tillering in rice

XY Li et al.

NATURE (2003)

Article Multidisciplinary Sciences

A draft sequence of the rice genome (Oryza sativa L. ssp japonica)

SA Goff et al.

SCIENCE (2002)

Article Multidisciplinary Sciences

A draft sequence of the rice genome (Oryza sativa L. ssp indica)

J Yu et al.

SCIENCE (2002)

Review Biochemistry & Molecular Biology

Deleteagene: a fast neutron deletion mutagenesis-based gene knockout system for plants

X Li et al.

COMPARATIVE AND FUNCTIONAL GENOMICS (2002)

Article Plant Sciences

An iAc/Ds gene and enhancer trapping system for insertional mutagenesis in rice

NM Upadhyaya et al.

FUNCTIONAL PLANT BIOLOGY (2002)

Article Biochemistry & Molecular Biology

RiceGAAS: an automated annotation system and database for rice genome sequence

K Sakata et al.

NUCLEIC ACIDS RESEARCH (2002)

Review Plant Sciences

Contribution of the Tos17 retrotransposon to rice functional genomics

H Hirochika

CURRENT OPINION IN PLANT BIOLOGY (2001)

Article Biochemistry & Molecular Biology

GeneSplicer: a new computational method for splice site prediction

M Pertea et al.

NUCLEIC ACIDS RESEARCH (2001)

Article Plant Sciences

The use of the Monsanto draft rice genome sequence in research

GF Barry

PLANT PHYSIOLOGY (2001)

Review Biochemistry & Molecular Biology

Gene traps: Tools for plant development and genomics

PS Springer

PLANT CELL (2000)

Article Plant Sciences

T-DNA insertional mutagenesis for functional genomics in rice

JS Jeon et al.

PLANT JOURNAL (2000)

Article Biochemistry & Molecular Biology

Ab initio gene finding in Drosophila genomic DNA

AA Salamov et al.

GENOME RESEARCH (2000)

Article Biotechnology & Applied Microbiology

Targeted screening for induced mutations

CM McCallum et al.

NATURE BIOTECHNOLOGY (2000)