期刊
BIOINFORMATICS
卷 16, 期 5, 页码 484-485出版社
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/16.5.484
关键词
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The Viral Genome DataBase (VGDB) contains detailed information of the genes and predicted protein sequences from 15 completely sequenced genomes of large (> 100 kb) viruses (2847 genes). The data that is stored includes DNA sequence, protein sequence, GenBank and user-entered notes, molecular weight (MW), isoelectric point (pI), amino acid content, A+T%, nucleotide frequency dinucleotide frequency and codon use. The VGDB is a mySQL database with a user-friendly JAVA GUI. Results of queries can be easily sorted by any of the individual parameters. Availability: The software and additional figures and information are available at http://athena.bioc.uvic.ca/genomes/index.html. Contact: cupton@uvic.ca
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