相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Reuse of public genome-wide gene expression data
Johan Rung et al.
NATURE REVIEWS GENETICS (2013)
ArrayExpress update-trends in database growth and links to data analysis tools
Gabriella Rustici et al.
NUCLEIC ACIDS RESEARCH (2013)
Comprehensive molecular portraits of human breast tumours
Daniel C. Koboldt et al.
NATURE (2012)
IMP: a multi-species functional genomics portal for integration, visualization and prediction of protein functions and networks
Aaron K. Wong et al.
NUCLEIC ACIDS RESEARCH (2012)
Subtype and pathway specific responses to anticancer compounds in breast cancer
Laura M. Heiser et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Making sense out of massive data by going beyond differential expression
Patrick R. Schmid et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
ProfileChaser: searching microarray repositories based on genome-wide patterns of differential expression
Jesse M. Engreitz et al.
BIOINFORMATICS (2011)
The BRENDA Tissue Ontology (BTO): the first all-integrating ontology of all organisms for enzyme sources
Marion Gremse et al.
NUCLEIC ACIDS RESEARCH (2011)
NCBI GEO: archive for functional genomics data sets-10 years on
Tanya Barrett et al.
NUCLEIC ACIDS RESEARCH (2011)
The Gene Expression Barcode: leveraging public data repositories to begin cataloging the human and murine transcriptomes
Matthew N. McCall et al.
NUCLEIC ACIDS RESEARCH (2011)
PILGRM: an interactive data-driven discovery platform for expert biologists
Casey S. Greene et al.
NUCLEIC ACIDS RESEARCH (2011)
Frozen robust multiarray analysis (fRMA)
Matthew N. McCall et al.
BIOSTATISTICS (2010)
A global map of human gene expression
Margus Lukk et al.
NATURE BIOTECHNOLOGY (2010)
Tackling the widespread and critical impact of batch effects in high-throughput data
Jeffrey T. Leek et al.
NATURE REVIEWS GENETICS (2010)
Bayesian approach to transforming public gene expression repositories into disease diagnosis databases
Haiyan Huang et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Simultaneous Genome-Wide Inference of Physical, Genetic, Regulatory, and Functional Pathway Components
Christopher Y. Park et al.
PLOS COMPUTATIONAL BIOLOGY (2010)
TopHat: discovering splice junctions with RNA-Seq
Cole Trapnell et al.
BIOINFORMATICS (2009)
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Ben Langmead et al.
GENOME BIOLOGY (2009)
Predicting gene function in a hierarchical context with an ensemble of classifiers
Yuanfang Guan et al.
GENOME BIOLOGY (2008)
A gene expression bar code for microarray data
Michael J. Zilliox et al.
NATURE METHODS (2007)
Exploring the functional landscape of gene expression: directed search of large microarray compendia
Matthew A. Hibbs et al.
BIOINFORMATICS (2007)
Cytokine-like 1 (CYTL1) regulates the chondrogenesis of mesenchymal cells
Jae-Sung Kim et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
The connectivity map: Using gene-expression signatures to connect small molecules, genes, and disease
Justin Lamb et al.
SCIENCE (2006)
Hierarchical multi-label prediction of gene function
Z Barutcuoglu et al.
BIOINFORMATICS (2006)
Gene expression profiling differentiates germ cell tumors from other cancers and defines subtype-specific signatures
D Juric et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
PAGE: Parametric analysis of gene set enrichment
SY Kim et al.
BMC BIOINFORMATICS (2005)
A DNA microarray survey of gene expression in normal human tissues
R Shyamsundar et al.
GENOME BIOLOGY (2005)
Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data
MH Dai et al.
NUCLEIC ACIDS RESEARCH (2005)
Maintenance of pluripotency in human and mouse embryonic stem cells through activation of Wnt signaling by a pharmacological GSK-3-specific inhibitor
N Sato et al.
NATURE MEDICINE (2004)
The Wnt signaling pathway in development and disease
CY Logan et al.
ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY (2004)
A comparative study of feature selection and multiclass classification methods for tissue classification based on gene expression
T Li et al.
BIOINFORMATICS (2004)
Exploration, normalization, and summaries of high density oligonucleotide array probe level data
RA Irizarry et al.
BIOSTATISTICS (2003)
Robust estimators for expression analysis
E Hubbell et al.
BIOINFORMATICS (2002)
Diagnosis of multiple cancer types by shrunken centroids of gene expression
R Tibshirani et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
Multiclass cancer diagnosis using tumor gene expression signatures
S Ramaswamy et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
Missing value estimation methods for DNA microarrays
O Troyanskaya et al.
BIOINFORMATICS (2001)
Cancer - Wnt signaling in oncogenesis and embryogenesis - a look outside the nucleus
M Peifer et al.
SCIENCE (2000)
分享论文
