4.7 Article

RIP-chip enrichment analysis

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

EBV and human microRNAs co-target oncogenic and apoptotic viral and human genes during latency

Kasandra J. Riley et al.

EMBO JOURNAL (2012)

Article Biotechnology & Applied Microbiology

ChIP-chip versus ChIP-seq: Lessons for experimental design and data analysis

Joshua W. K. Ho et al.

BMC GENOMICS (2011)

Article Biochemical Research Methods

A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins

Shivendra Kishore et al.

NATURE METHODS (2011)

Review Genetics & Heredity

Understanding splicing regulation through RNA splicing maps

Joshua T. Witten et al.

TRENDS IN GENETICS (2011)

Article Biochemical Research Methods

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data

Lihua J. Zhu et al.

BMC BIOINFORMATICS (2010)

Article Multidisciplinary Sciences

Mammalian microRNAs predominantly act to decrease target mRNA levels

Huili Guo et al.

NATURE (2010)

Article Biochemistry & Molecular Biology

iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution

Julian Koenig et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2010)

Review Biochemistry & Molecular Biology

MicroRNAs: Target Recognition and Regulatory Functions

David P. Bartel

Article Biochemistry & Molecular Biology

Coordinated posttranscriptional mRNA population dynamics during T-cell activation

Neelanjan Mukherjee et al.

MOLECULAR SYSTEMS BIOLOGY (2009)

Review Genetics & Heredity

RNA-Seq: a revolutionary tool for transcriptomics

Zhong Wang et al.

NATURE REVIEWS GENETICS (2009)

Review Genetics & Heredity

ChIP-seq: advantages and challenges of a maturing technology

Peter J. Park

NATURE REVIEWS GENETICS (2009)

Article Biochemistry & Molecular Biology

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

John C. Marioni et al.

GENOME RESEARCH (2008)

Article Biochemistry & Molecular Biology

Genome-wide analysis identifies interleukin-10 mRNA as target of tristetraprolin

Georg Stoecklin et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2008)

Article Orthopedics

Normalization strategies for mRNA expression data in cartilage research

K. Fundel et al.

OSTEOARTHRITIS AND CARTILAGE (2008)

Article Multidisciplinary Sciences

A biochemical approach to identifying microRNA targets

Fedor V. Karginov et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Multidisciplinary Sciences

Genome-wide mapping of in vivo protein-DNA interactions

David S. Johnson et al.

SCIENCE (2007)

Review Cell Biology

Editor meets silencer: crosstalk between RNA editing and RNA interference

Kazuko Nishikura

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2006)

Article Biochemical Research Methods

Comparison of Affymetrix GeneChip expression measures

RA Irizarry et al.

BIOINFORMATICS (2006)

Article Multidisciplinary Sciences

Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles

A Subramanian et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Biochemical Research Methods

Evaluation of normalization methods for microarray

T Park et al.

BMC BIOINFORMATICS (2003)

Article Mathematical & Computational Biology

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

RA Irizarry et al.

BIOSTATISTICS (2003)

Review Statistics & Probability

Model-based clustering, discriminant analysis, and density estimation

C Fraley et al.

JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION (2002)

Article Multidisciplinary Sciences

Genome-wide location and function of DNA binding proteins

B Ren et al.

SCIENCE (2000)