相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Touring Protein Space with Matt
Noah M. Daniels et al.
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS (2012)
A multiple-template approach to protein threading
Jian Peng et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2011)
Recognition of beta-structural motifs using hidden Markov models trained with simulated evolution
Anoop Kumar et al.
BIOINFORMATICS (2010)
Markov random fields reveal an N-terminal double beta-propeller motif as part of a bacterial hybrid two-component sensor system
Matt Menke et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Sequence specificity, statistical potentials, and three-dimensional structure prediction with self-correcting distance geometry calculations of β-sheet formation in proteins
Hongyao Zhu et al.
PROTEIN SCIENCE (2010)
Augmented training of hidden Markov models to recognize remote homologs via simulated evolution
Anoop Kumar et al.
BIOINFORMATICS (2009)
Conditional Graphical Models for Protein Structural Motif Recognition
Yan Liu et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2009)
Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima
Ying Zhang et al.
SCIENCE (2009)
ROC analysis: applications to the classification of biological sequences and 3D structures
Paolo Sonego et al.
BRIEFINGS IN BIOINFORMATICS (2008)
Graphical models of residue coupling in protein families
John Thomas et al.
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS (2008)
Matt: Local flexibility aids protein multiple structure alignment
Matthew Menke et al.
PLOS COMPUTATIONAL BIOLOGY (2008)
The Pfam protein families database
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2008)
The SUPERFAMILY database in 2007: families and functions
Derek Wilson et al.
NUCLEIC ACIDS RESEARCH (2007)
The HHpred interactive server for protein homology detection and structure prediction
J Söding et al.
NUCLEIC ACIDS RESEARCH (2005)
TM-align: a protein structure alignment algorithm based on the TM-score
Y Zhang et al.
NUCLEIC ACIDS RESEARCH (2005)
Prediction of strand pairing in antiparallel and parallel β-sheets using information theory
RE Steward et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2002)
Predicting the beta-helix fold from protein sequence data
L Cowen et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2002)
BETAWRAP:: Successful prediction of parallel β-helices from primary sequence reveals an association with many microbial pathogens
P Bradley et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
Evaluation of protein multiple alignments by SAM-T99 using the BAliBASE multiple alignment test set
K Karplus et al.
BIOINFORMATICS (2001)
The Protein Data Bank
HM Berman et al.
NUCLEIC ACIDS RESEARCH (2000)