期刊
BIOINFORMATICS
卷 28, 期 3, 页码 436-438出版社
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btr685
关键词
-
类别
资金
- National Institutes of Health [5-R01-HL0090480, 3-R01-HG004872]
- Crohns and Colitis Foundation of America [WU-09-72/2905035N]
- Bill & Melinda Gates Foundation [WU-09-187/51678]
- Howard Hughes Medical Institute
As microbial ecologists take advantage of high-throughput analytical techniques to describe microbial communities across everincreasing numbers of samples, the need for new analysis tools that reveal the intrinsic spatial patterns and structures of these populations is crucial. Here we present SitePainter, an interactive graphical tool that allows investigators to create or upload pictures of their study site, load diversity analyses data and display both diversity and taxonomy results in a spatial context. Features of SitePainter include: visualizing alpha-diversity, using taxonomic summaries; visualizing beta-diversity, using results from multidimensional scaling methods; and animating relationships among microbial taxa or pathways overtime. SitePainter thus increases the visual power and ability to explore spatially explicit studies. Availability: https://sourceforge. net/projects/sitepainter
作者
我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。
推荐
暂无数据