4.7 Article

A wide repertoire of miRNA binding sites: prediction and functional implications

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Efficient use of accessibility in microRNA target prediction

Ray M. Marin et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemistry & Molecular Biology

RepTar: a database of predicted cellular targets of host and viral miRNAs

Naama Elefant et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemistry & Molecular Biology

Signatures of RNA binding proteins globally coupled to effective microRNA target sites

Anders Jacobsen et al.

GENOME RESEARCH (2010)

Article Biochemistry & Molecular Biology

Expanding the MicroRNA Targeting Code: Functional Sites with Centered Pairing

Chanseok Shin et al.

MOLECULAR CELL (2010)

Article Biochemistry & Molecular Biology

mRNA turnover rate limits siRNA and microRNA efficacy

Erik Larsson et al.

MOLECULAR SYSTEMS BIOLOGY (2010)

Article Biochemistry & Molecular Biology

Target mRNA abundance dilutes microRNA and siRNA activity

Aaron Arvey et al.

MOLECULAR SYSTEMS BIOLOGY (2010)

Article Biochemistry & Molecular Biology

Freiburg RNA Tools: a web server integrating INTARNA, EXPARNA and LocARNA

Cameron Smith et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biotechnology & Applied Microbiology

Comprehensive modeling of microRNA targets predicts functional non-conserved and non-canonical sites

Doron Betel et al.

GENOME BIOLOGY (2010)

Review Biochemical Research Methods

Lost in translation: an assessment and perspective for computational microRNA target identification

Panagiotis Alexiou et al.

BIOINFORMATICS (2009)

Review Biochemistry & Molecular Biology

MicroRNAs: Target Recognition and Regulatory Functions

David P. Bartel

Article Biochemistry & Molecular Biology

Most mammalian mRNAs are conserved targets of microRNAs

Robin C. Friedman et al.

GENOME RESEARCH (2009)

Article Biochemistry & Molecular Biology

DIANA-microT web server: elucidating microRNA functions through target prediction

M. Maragkakis et al.

NUCLEIC ACIDS RESEARCH (2009)

Article Biochemistry & Molecular Biology

The database of experimentally supported targets: a functional update of TarBase

Giorgos L. Papadopoulos et al.

NUCLEIC ACIDS RESEARCH (2009)

Review Microbiology

Viral and cellular MicroRNAs as determinants of viral pathogenesis and immunity

Eva Gottwein et al.

CELL HOST & MICROBE (2008)

Article Multidisciplinary Sciences

The impact of microRNAs on protein output

Daehyun Baek et al.

NATURE (2008)

Article Multidisciplinary Sciences

Widespread changes in protein synthesis induced by microRNAs

Matthias Selbach et al.

NATURE (2008)

Article Immunology

Human microRNAs regulate stress-induced immune responses mediated by the receptor NKG2D

Noam Stern-Ginossar et al.

NATURE IMMUNOLOGY (2008)

Article Biochemistry & Molecular Biology

miRBase: tools for microRNA genomics

Sam Griffiths-Jones et al.

NUCLEIC ACIDS RESEARCH (2008)

Article Multidisciplinary Sciences

A viral microRNA functions as an orthologue of cellular miR-155

Eva Gottwein et al.

NATURE (2007)

Article Genetics & Heredity

The role of site accessibility in microRNA target recognition

Michael Kertesz et al.

NATURE GENETICS (2007)

Article Multidisciplinary Sciences

Host immune system gene targeting by a viral miRNA

Noam Stern-Ginossar et al.

SCIENCE (2007)

Article Biochemistry & Molecular Biology

MicroRNA targeting specificity in mammals: Determinants beyond seed pairing

Andrew Grimson et al.

MOLECULAR CELL (2007)

Article Biochemistry & Molecular Biology

A mammalian microRNA expression atlas based on small RNA library sequencing

Pablo Landgraf et al.

Article Biochemistry & Molecular Biology

Perfect seed pairing is not a generally reliable predictor for miRNA-target interactions

Dominic Didiano et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2006)

Article Biochemical Research Methods

Thermodynamics of RNA-RNA binding

U Mückstein et al.

BIOINFORMATICS (2006)

Article Biochemistry & Molecular Biology

miRBase: microRNA sequences, targets and gene nomenclature

Sam Griffiths-Jones et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Multidisciplinary Sciences

The widespread impact of mammalian microRNAs on mRNA repression and evolution

KKH Farh et al.

SCIENCE (2005)

Review Biochemistry & Molecular Biology

MicroRNA function in animal development

E Wienholds et al.

FEBS LETTERS (2005)

Article Multidisciplinary Sciences

Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution

J Cheng et al.

SCIENCE (2005)

Article Multidisciplinary Sciences

Kaposi's sarcoma-associated herpesvirus expresses an array of viral microRNAs in latently infected cells

XZ Cai et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Biochemistry & Molecular Biology

Principles of MicroRNA-target recognition

J Brennecke et al.

PLOS BIOLOGY (2005)

Article Cell Biology

Specificity of microRNA target selection in translational repression

JG Doench et al.

GENES & DEVELOPMENT (2004)

Article Biochemistry & Molecular Biology

The microRNA Registry

S Griffiths-Jones

NUCLEIC ACIDS RESEARCH (2004)

Review Biochemistry & Molecular Biology

Human MicroRNA targets

B John et al.

PLOS BIOLOGY (2004)

Article Biochemistry & Molecular Biology

Fast and effective prediction of microRNA/target duplexes

M Rehmsmeier et al.

Review Biochemistry & Molecular Biology

Immunomodulation by cytomegaloviruses: manipulative strategies beyond evasion

ES Mocarski

TRENDS IN MICROBIOLOGY (2002)