4.7 Article

TopiaryExplorer: visualizing large phylogenetic trees with environmental metadata

期刊

BIOINFORMATICS
卷 27, 期 21, 页码 3067-3069

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OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btr517

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资金

  1. Bill and Melinda Gates Foundation
  2. National Institutes of Health [DK78669, HG4872 HG4866, 3T15LM009451-03S1]
  3. Howard Hughes Medical Institute

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Motivation: Microbial community profiling is a highly active area of research, but tools that facilitate visualization of phylogenetic trees and associated environmental data have not kept up with the increasing quantity of data generated in these studies. Results: TopiaryExplorer supports the visualization of very large phylogenetic trees, including features such as the automated coloring of branches by environmental data, manipulation of trees and incorporation of per-tip metadata (e.g. taxonomic labels).

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