相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Evolutionary Fingerprinting of Genes
Sergei L. Kosakovsky Pond et al.
MOLECULAR BIOLOGY AND EVOLUTION (2010)
CodonTest: Modeling Amino Acid Substitution Preferences in Coding Sequences
Wayne Delport et al.
PLOS COMPUTATIONAL BIOLOGY (2010)
An Evolutionary Model-Based Algorithm for Accurate Phylogenetic Breakpoint Mapping and Subtype Prediction in HIV-1
Sergei L. Kosakovsky Pond et al.
PLOS COMPUTATIONAL BIOLOGY (2009)
Spidermonkey: rapid detection of co-evolving sites using Bayesian graphical models
Art F. Y. Poon et al.
BIOINFORMATICS (2008)
A maximum likelihood method for detecting directional evolution in protein sequences and its application to influenza a virus
Sergei L. Kosakovsky Pond et al.
MOLECULAR BIOLOGY AND EVOLUTION (2008)
Frequent Toggling between Alternative Amino Acids Is Driven by Selection in HIV-1
Wayne Delport et al.
PLOS PATHOGENS (2008)
GARD: a genetic algorithm for recombination detection
Sergei L. Kosakovsky Pond et al.
BIOINFORMATICS (2006)
Robust inference of positive selection from recombining coding sequences
Konrad Scheffler et al.
BIOINFORMATICS (2006)
Automated phylogenetic detection of recombination using a genetic algorithm
Sergei L. Kosakovsky Pond et al.
MOLECULAR BIOLOGY AND EVOLUTION (2006)
Adaptation to different human populations by HIV-1 revealed by codon-based analyses
Sergei L. Kosakovsky Pond et al.
PLOS COMPUTATIONAL BIOLOGY (2006)
Datamonkey: rapid detection of selective pressure on individual sites of codon alignments
SLK Pond et al.
BIOINFORMATICS (2005)
Not so different after all: A comparison of methods for detecting amino acid sites under selection
SLK Pond et al.
MOLECULAR BIOLOGY AND EVOLUTION (2005)
ProtTest: selection of best-fit models of protein evolution
F Abascal et al.
BIOINFORMATICS (2005)
Bayes empirical Bayes inference of amino acid sites under positive selection
ZH Yang et al.
MOLECULAR BIOLOGY AND EVOLUTION (2005)
HyPhy: hypothesis testing using phylogenies
SLK Pond et al.
BIOINFORMATICS (2005)
A fast algorithm for joint reconstruction of ancestral amino acid sequences
T Pupko et al.
MOLECULAR BIOLOGY AND EVOLUTION (2000)