相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Correction of sequencing errors in a mixed set of reads
Leena Salmela
BIOINFORMATICS (2010)
Reptile: representative tiling for short read error correction
Xiao Yang et al.
BIOINFORMATICS (2010)
A Parallel Algorithm for Error Correction in High-Throughput Short-Read Data on CUDA-Enabled Graphics Hardware
Haixiang Shi et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2010)
Slider-maximum use of probability information for alignment of short sequence reads and SNP detection
Nawar Malhis et al.
BIOINFORMATICS (2009)
MOM: maximum oligonucleotide mapping
Hugh L. Eaves et al.
BIOINFORMATICS (2009)
ProbeMatch: rapid alignment of oligonucleotides to genome allowing both gaps and mismatches
You Jung Kim et al.
BIOINFORMATICS (2009)
SHREC: a short-read error correction method
Jan Schroeder et al.
BIOINFORMATICS (2009)
PASS: a program to align short sequences
Davide Campagna et al.
BIOINFORMATICS (2009)
PerM: efficient mapping of short sequencing reads with periodic full sensitive spaced seeds
Yangho Chen et al.
BIOINFORMATICS (2009)
CloudBurst: highly sensitive read mapping with MapReduce
Michael C. Schatz
BIOINFORMATICS (2009)
Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2009)
De novo fragment assembly with short mate-paired reads: Does the read length matter?
Mark J. Chaisson et al.
GENOME RESEARCH (2009)
ABySS: A parallel assembler for short read sequence data
Jared T. Simpson et al.
GENOME RESEARCH (2009)
SHRiMP: Accurate Mapping of Short Color-space Reads
Stephen M. Rumble et al.
PLOS COMPUTATIONAL BIOLOGY (2009)
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Ben Langmead et al.
GENOME BIOLOGY (2009)
ZOOM! Zillions of oligos mapped
Hao Lin et al.
BIOINFORMATICS (2008)
SeqMap: mapping massive amount of oligonucleotides to the genome
Hui Jiang et al.
BIOINFORMATICS (2008)
SOAP: short oligonucleotide alignment program
Ruiqiang Li et al.
BIOINFORMATICS (2008)
Using quality scores and longer reads improves accuracy of Solexa read mapping
Andrew D. Smith et al.
BMC BIOINFORMATICS (2008)
ALLPATHS: De novo assembly of whole-genome shotgun microreads
Jonathan Butler et al.
GENOME RESEARCH (2008)
Mapping short DNA sequencing reads and calling variants using mapping quality scores
Heng Li et al.
GENOME RESEARCH (2008)
De novo bacterial genome sequencing: Millions of very short reads assembled on a desktop computer
David Hernandez et al.
GENOME RESEARCH (2008)
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
Daniel R. Zerbino et al.
GENOME RESEARCH (2008)
The impact of next-generation sequencing technology on genetics
Elaine R. Mardis
TRENDS IN GENETICS (2008)
Extending assembly of short DNA sequences to handle error
William R. Jeck et al.
BIOINFORMATICS (2007)
SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing
Juliane C. Dohm et al.
GENOME RESEARCH (2007)
Assembling millions of short DNA sequences using SSAKE
Rene L. Warren et al.
BIOINFORMATICS (2007)
The fragment assembly string graph
EW Myers
BIOINFORMATICS (2005)
Space efficient linear time construction of suffix arrays
Pang Ko et al.
JOURNAL OF DISCRETE ALGORITHMS (2005)
Constructing suffix arrays in linear time
Dong Kyue Kim et al.
JOURNAL OF DISCRETE ALGORITHMS (2005)
分享论文
