4.7 Article

VARNA: Interactive drawing and editing of the RNA secondary structure

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BIOINFORMATICS
卷 25, 期 15, 页码 1974-1975

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OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btp250

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  1. ANR [ANR-06-BLAN-0045, GAMMA 07-2_195422]
  2. Agence Nationale de la Recherche (ANR) [ANR-06-BLAN-0045] Funding Source: Agence Nationale de la Recherche (ANR)

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Description: VARNA is a tool for the automated drawing, visualization and annotation of the secondary structure of RNA, designed as a companion software for web servers and databases. Features: VARNA implements four drawing algorithms, supports input/output using the classic formats dbn, ct, bpseq and RNAML and exports the drawing as five picture formats, either pixel-based (JPEG, PNG) or vector-based (SVG, EPS and XFIG). It also allows manual modi. cation and structural annotation of the resulting drawing using either an interactive point and click approach, within a web server or through command-line arguments.

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