相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Non-random mutation: The evolution of targeted hypermutation and hypomutation
Inigo Martincorena et al.
BIOESSAYS (2013)
Archetypal analysis of diverse Pseudomonas aeruginosa transcriptomes reveals adaptation in cystic fibrosis airways
Juliane Charlotte Thogersen et al.
BMC BIOINFORMATICS (2013)
The Entner-Doudoroff pathway empowers Pseudomonas putida KT2440 with a high tolerance to oxidative stress
Max Chavarria et al.
ENVIRONMENTAL MICROBIOLOGY (2013)
Did life originate from a global chemical reactor?
E. E. Stueeken et al.
GEOBIOLOGY (2013)
Molecular evolution of the nicotinic acid requirement within the Shigella/EIEC pathotype
Maria Letizia Di Martino et al.
INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY (2013)
Community-wide plasmid gene mobilization and selection
Vladimir Sentchilo et al.
ISME JOURNAL (2013)
How Escherichia coli Tolerates Profuse Hydrogen Peroxide Formation by a Catabolic Pathway
Sripriya Ravindra Kumar et al.
JOURNAL OF BACTERIOLOGY (2013)
Shared control of gene expression in bacteria by transcription factors and global physiology of the cell
Sara Berthoumieux et al.
MOLECULAR SYSTEMS BIOLOGY (2013)
Basic and applied uses of genome-scale metabolic network reconstructions of Escherichia coli
Douglas McCloskey et al.
MOLECULAR SYSTEMS BIOLOGY (2013)
Pyrimidine homeostasis is accomplished by directed overflow metabolism
Marshall Louis Reaves et al.
NATURE (2013)
Microbial production of short-chain alkanes
Yong Jun Choi et al.
NATURE (2013)
Coordination of bacterial proteome with metabolism by cyclic AMP signalling
Conghui You et al.
NATURE (2013)
Potentiating antibacterial activity by predictably enhancing endogenous microbial ROS production
Mark P. Brynildsen et al.
NATURE BIOTECHNOLOGY (2013)
Early bioenergetic evolution
Filipa L. Sousa et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2013)
Manganese-oxidizing photosynthesis before the rise of cyanobacteria
Jena E. Johnson et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Evolutionary remodeling of global regulatory networks during long-term bacterial adaptation to human hosts
Soren Damkiaer et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Fe-S Cluster Biosynthesis Controls Uptake of Aminoglycosides in a ROS-Less Death Pathway
Benjamin Ezraty et al.
SCIENCE (2013)
Cell Death from Antibiotics Without the Involvement of Reactive Oxygen Species
Yuanyuan Liu et al.
SCIENCE (2013)
Killing by Bactericidal Antibiotics Does Not Depend on Reactive Oxygen Species
Iris Keren et al.
SCIENCE (2013)
Phenotypic and Genetic Consequences of Protein Damage
Anita Krisko et al.
PLOS GENETICS (2013)
Endogenous Stress Caused by Faulty Oxidation Reactions Fosters Evolution of 2,4-Dinitrotoluene-Degrading Bacteria
Danilo Perez-Pantoja et al.
PLOS GENETICS (2013)
Genome Analysis of a Transmissible Lineage of Pseudomonas aeruginosa Reveals Pathoadaptive Mutations and Distinct Evolutionary Paths of Hypermutators
Rasmus Lykke Marvig et al.
PLOS GENETICS (2013)
A Modular Hierarchy-Based Theory of the Chemical Origins of Life Based on Molecular Complementarity
Robert Root-Bernstein
ACCOUNTS OF CHEMICAL RESEARCH (2012)
Bactericidal Antibiotics Do Not Appear To Cause Oxidative Stress in Listeria monocytogenes
Louise Feld et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Pentachlorophenol Hydroxylase, a Poorly Functioning Enzyme Required for Degradation of Pentachlorophenol by Sphingobium chlorophenolicum
Klara Hlouchova et al.
BIOCHEMISTRY (2012)
Elements of Metabolic Evolution
Claudia Huber et al.
CHEMISTRY-A EUROPEAN JOURNAL (2012)
Metamobilomics u expanding our knowledge on the pool of plasmid encoded traits in natural environments using high-throughput sequencing
L. L. Li et al.
CLINICAL MICROBIOLOGY AND INFECTION (2012)
Antimicrobials as promoters of genetic variation
Jesus Blazquez et al.
CURRENT OPINION IN MICROBIOLOGY (2012)
Genomic analysis of the potential for aromatic compounds biodegradation in Burkholderiales
Danilo Perez-Pantoja et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Autophagy and bacterial infectious diseases
Jae-Min Yuk et al.
EXPERIMENTAL AND MOLECULAR MEDICINE (2012)
The Entner-Doudoroff Pathway Is Obligatory for Gluconate Utilization and Contributes to the Pathogenicity of Vibrio cholerae
Tapas Patra et al.
JOURNAL OF BACTERIOLOGY (2012)
Genomic Variation among Contemporary Pseudomonas aeruginosa Isolates from Chronically Infected Cystic Fibrosis Patients
Jade C. S. Chung et al.
JOURNAL OF BACTERIOLOGY (2012)
Foundations for the design and implementation of synthetic genetic circuits
Adrian L. Slusarczyk et al.
NATURE REVIEWS GENETICS (2012)
Nicotinamide dependence of uropathogenic Escherichia coli UTI89 and application of nadB as a neutral insertion site
Zhaoli Li et al.
MICROBIOLOGY-SGM (2012)
200 NEJM ANNIVERSARY ARTICLE The Perpetual Challenge of Infectious Diseases
Anthony S. Fauci et al.
NEW ENGLAND JOURNAL OF MEDICINE (2012)
Non-Traditional Antibacterial Screening Approaches for the Identification of Novel Inhibitors of the Glyoxylate Shunt in Gram-Negative Pathogens
Kelly C. Fahnoe et al.
PLOS ONE (2012)
Oxidation of the Guanine Nucleotide Pool Underlies Cell Death by Bactericidal Antibiotics
James J. Foti et al.
SCIENCE (2012)
Evolutionary Stability of a Refactored Phage Genome
Rachael Springman et al.
ACS SYNTHETIC BIOLOGY (2012)
The Emergence and Early Evolution of Biological Carbon-Fixation
Rogier Braakman et al.
PLOS COMPUTATIONAL BIOLOGY (2012)
Alternative Pathways of Carbon Dioxide Fixation: Insights into the Early Evolution of Life?
Georg Fuchs
ANNUAL REVIEW OF MICROBIOLOGY, VOL 65 (2011)
Adventures in Rhodococcus - from steroids to explosives
Katherine C. Yam et al.
CANADIAN JOURNAL OF MICROBIOLOGY (2011)
Life's demons: information and order in biology
Philippe M. Binder et al.
EMBO REPORTS (2011)
A formal theory of the selfish gene
A. Gardner et al.
JOURNAL OF EVOLUTIONARY BIOLOGY (2011)
Association of dnt genes of Burkholderia sp DNT with the substrate-blind regulator DntR draws the evolutionary itinerary of 2,4-dinitrotoluene biodegradation
Aitor de las Heras et al.
MOLECULAR MICROBIOLOGY (2011)
The genome and surface proteome of Capnocytophaga canimorsus reveal a key role of glycan foraging systems in host glycoproteins deglycosylation
Pablo Manfredi et al.
MOLECULAR MICROBIOLOGY (2011)
Microbial degradation of aromatic compounds - from one strategy to four
Georg Fuchs et al.
NATURE REVIEWS MICROBIOLOGY (2011)
Phenylalanine induces Burkholderia cenocepacia phenylacetic acid catabolism through degradation to phenylacetyl-CoA in synthetic cystic fibrosis sputum medium
Harry Yudistira et al.
MICROBIAL PATHOGENESIS (2011)
High Levels of Bioplastic Are Produced in Fertile Transplastomic Tobacco Plants Engineered with a Synthetic Operon for the Production of Polyhydroxybutyrate
Karen Bohmert-Tatarev et al.
PLANT PHYSIOLOGY (2011)
Glucose Metabolism in Legionella pneumophila: Dependence on the Entner-Doudoroff Pathway and Connection with Intracellular Bacterial Growth
Eiji Harada et al.
JOURNAL OF BACTERIOLOGY (2010)
High-throughput generation, optimization and analysis of genome-scale metabolic models
Christopher S. Henry et al.
NATURE BIOTECHNOLOGY (2010)
How antibiotics kill bacteria: from targets to networks
Michael A. Kohanski et al.
NATURE REVIEWS MICROBIOLOGY (2010)
Lack of evolvability in self-sustaining autocatalytic networks constraints metabolism-first scenarios for the origin of life
Vera Vasas et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Metabolism Is Not Boring INTRODUCTION
L. Bryan Ray
SCIENCE (2010)
A Novel Semi-biosynthetic Route for Artemisinin Production Using Engineered Substrate-Promiscuous P450BM3
Jeffrey A. Dietrich et al.
ACS CHEMICAL BIOLOGY (2009)
Systematic phenome analysis of Escherichia coli multiple-knockout mutants reveals hidden reactions in central carbon metabolism
Kenji Nakahigashi et al.
MOLECULAR SYSTEMS BIOLOGY (2009)
The second wave of synthetic biology: from modules to systems
Priscilla E. M. Purnick et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2009)
Understanding human metabolic physiology: a genome-to-systems approach
Monica L. Mo et al.
TRENDS IN BIOTECHNOLOGY (2009)
Studies of a Ring-Cleaving Dioxygenase Illuminate the Role of Cholesterol Metabolism in the Pathogenesis of Mycobacterium tuberculosis
Katherine C. Yam et al.
PLOS PATHOGENS (2009)
Side effects of antibiotics on genetic variability
Alejandro Couce et al.
FEMS MICROBIOLOGY REVIEWS (2009)
(p)ppGpp: Still Magical?
Katarzyna Potrykus et al.
ANNUAL REVIEW OF MICROBIOLOGY (2008)
A Functional Phenylacetic Acid Catabolic Pathway Is Required for Full Pathogenicity of Burkholderia cenocepacia in the Caenorhabditis elegans Host Model
Robyn J. Law et al.
JOURNAL OF BACTERIOLOGY (2008)
The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli
Adam M. Feist et al.
NATURE BIOTECHNOLOGY (2008)
New surveyor tools for charting microbial metabolic maps
Rainer Breitling et al.
NATURE REVIEWS MICROBIOLOGY (2008)
Bacteria subsisting on antibiotics
Gautam Dantas et al.
SCIENCE (2008)
Capnocytophaga canimorsus:: A human pathogen feeding at the surface of epithelial cells and phagocytes
Manuela Mally et al.
PLOS PATHOGENS (2008)
Chlorohenzoate inhibits growth and induces stress proteins in the PCB-degrading bacterium Burkholderia xenovorans LB400
Paula Martinez et al.
ARCHIVES OF MICROBIOLOGY (2007)
The environmental fate of organic pollutants through the global microbial metabolism
Manuel J. Gomez et al.
MOLECULAR SYSTEMS BIOLOGY (2007)
Multiple high-throughput analyses monitor the response of E-coli to perturbations
Nobuyoshi Ishii et al.
SCIENCE (2007)
Response to (chloro)biphenyls of the polychlorobiphenyl-degrader Burkholderia xenovorans LB400 involves stress proteins also induced by heat shock and oxidative stress
Loreine Agullo et al.
FEMS MICROBIOLOGY LETTERS (2007)
Stress-induced mutagenesis in bacteria
Patricia L. Foster
CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY (2007)
Chance and necessity in the evolution of minimal metabolic networks
C Pál et al.
NATURE (2006)
Genomic buffering mitigates the effects of deleterious mutations in bacteria
S Maisnier-Patin et al.
NATURE GENETICS (2005)
Refactoring bacteriophage T7
Leon Y. Chan et al.
MOLECULAR SYSTEMS BIOLOGY (2005)
Universality in intermediary metabolism
E Smith et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Cellulosomes: Plant-cell-wall-degrading enzyme complexes
RH Doi et al.
NATURE REVIEWS MICROBIOLOGY (2004)
Stress-induced mutagenesis in bacteria
I Bjedov et al.
SCIENCE (2003)
Differential expression of the components of the two alkane hydroxylases from Pseudomonas aeruginosa
MM Marín et al.
JOURNAL OF BACTERIOLOGY (2003)
On the origins of cells: a hypothesis for the evolutionary transitions from abiotic geochemistry to chemoautotrophic prokaryotes, and from prokaryotes to nucleated cells
W Martin et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2003)
Large scale production of recombinant human lactoferrin in the milk of transgenic cows
PHC van Berkel et al.
NATURE BIOTECHNOLOGY (2002)
The molecular roots of compositional inheritance
D Segré et al.
JOURNAL OF THEORETICAL BIOLOGY (2001)
Detection of genes essential in specific niches by signature-tagged mutagenesis
DE Lehoux et al.
CURRENT OPINION IN BIOTECHNOLOGY (2000)
Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp APS
S Shigenobu et al.
NATURE (2000)
Engineering bacteria for bioremediation
DH Pieper et al.
CURRENT OPINION IN BIOTECHNOLOGY (2000)
In vivo-induced genes in Pseudomonas aeruginosa
M Handfield et al.
INFECTION AND IMMUNITY (2000)
Steady-state kinetic characterization and crystallization of a polychlorinated biphenyl-transforming dioxygenase
NYR Imbeault et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2000)
分享论文
