4.8 Article

Characterization of early autophagy signaling by quantitative phosphoproteomics

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Modulation of Serines 17 and 24 in the LC3-interacting Region of Bnip3 Determines Pro-survival Mitophagy versus Apoptosis

Yanyan Zhu et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2013)

Article Gastroenterology & Hepatology

Calcium/calmodulin-dependent protein kinase IV limits organ damage in hepatic ischemia-reperfusion injury through induction of autophagy

John Evankovich et al.

AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY (2012)

Review Biochemistry & Molecular Biology

The Degradative Inventory of the Cell: Proteomic Insights

Rudolf Engelke et al.

ANTIOXIDANTS & REDOX SIGNALING (2012)

Review Biochemistry & Molecular Biology

Regulation and Function of Uncoordinated-51 Like Kinase Proteins

Edmond Y. Chan

ANTIOXIDANTS & REDOX SIGNALING (2012)

Editorial Material Cell Biology

Friend or food Different cues to the autophagosomal proteome

Andrea C. Becker et al.

AUTOPHAGY (2012)

Article Biochemistry & Molecular Biology

Leucyl-tRNA Synthetase Is an Intracellular Leucine Sensor for the mTORC1-Signaling Pathway

Jung Min Han et al.

Article Biochemical Research Methods

PhosphoSiteAnalyzer: A Bioinformatic Platform for Deciphering Phospho Proteomes Using Kinase Predictions Retrieved from NetworKIN

Martin V. Bennetzen et al.

JOURNAL OF PROTEOME RESEARCH (2012)

Article Biochemical Research Methods

A Quantitative Spatial Proteomics Analysis of Proteome Turnover in Human Cells

Francois-Michel Boisvert et al.

MOLECULAR & CELLULAR PROTEOMICS (2012)

Article Biochemical Research Methods

Identification of Autophagosome-associated Proteins and Regulators by Quantitative Proteomic Analysis and Genetic Screens

Joern Dengjel et al.

MOLECULAR & CELLULAR PROTEOMICS (2012)

Article Multidisciplinary Sciences

GSK3-TIP60-ULK1 Signaling Pathway Links Growth Factor Deprivation to Autophagy

Shu-Yong Lin et al.

SCIENCE (2012)

Review Cell Biology

Quantitative phosphoproteomics to characterize signaling networks

Kristoffer T. G. Rigbolt et al.

SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2012)

Review Immunology

Autophagy in the regulation of pathogen replication and adaptive immunity

Felix Randow et al.

TRENDS IN IMMUNOLOGY (2012)

Review Immunology

Autophagosomal protein dynamics and influenza virus infection

Veronica I. Dumit et al.

FRONTIERS IN IMMUNOLOGY (2012)

Review Oncology

Deconvoluting the context-dependent role for autophagy in cancer

Eileen White

NATURE REVIEWS CANCER (2012)

Review Cell Biology

Selective autophagy mediated by autophagic adapter proteins

Terje Johansen et al.

AUTOPHAGY (2011)

Article Biochemical Research Methods

Comparison of ERLIC-TiO2, HILIC-TiO2, and SCX-TiO2 for Global Phosphoproteomics Approaches

Mostafa Zarei et al.

JOURNAL OF PROTEOME RESEARCH (2011)

Article Biochemical Research Methods

GProX, a User-Friendly Platform for Bioinformatics Analysis and Visualization of Quantitative Proteomics Data

Kristoffer T. G. Rigbolt et al.

MOLECULAR & CELLULAR PROTEOMICS (2011)

Article Biochemistry & Molecular Biology

Serine 403 Phosphorylation of p62/SQSTM1 Regulates Selective Autophagic Clearance of Ubiquitinated Proteins

Gen Matsumoto et al.

MOLECULAR CELL (2011)

Article Multidisciplinary Sciences

Global quantification of mammalian gene expression control

Bjoern Schwanhaeusser et al.

NATURE (2011)

Article Multidisciplinary Sciences

Phosphorylation of the Autophagy Receptor Optineurin Restricts Salmonella Growth

Philipp Wild et al.

SCIENCE (2011)

Article Biochemistry & Molecular Biology

System-Wide Temporal Characterization of the Proteome and Phosphoproteome of Human Embryonic Stem Cell Differentiation

Kristoffer T. G. Rigbolt et al.

SCIENCE SIGNALING (2011)

Article Biochemistry & Molecular Biology

Glucose deprivation causes oxidative stress and stimulates aggresome formation and autophagy in cultured cardiac myocytes

Paola Marambio et al.

BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE (2010)

Article Cell Biology

The role of the Atg1/ULK1 complex in autophagy regulation

Noboru Mizushima

CURRENT OPINION IN CELL BIOLOGY (2010)

Article Cell Biology

TOR-dependent control of autophagy: biting the hand that feeds

Thomas P. Neufeld

CURRENT OPINION IN CELL BIOLOGY (2010)

Article Biochemistry & Molecular Biology

Negative Regulation of Vps34 by Cdk Mediated Phosphorylation

Tsuyoshi Furuya et al.

MOLECULAR CELL (2010)

Article Biochemistry & Molecular Biology

Untitled

Abid Kazi et al.

MOLECULAR MEDICINE (2010)

Article Multidisciplinary Sciences

Network organization of the human autophagy system

Christian Behrends et al.

NATURE (2010)

Review Multidisciplinary Sciences

Autophagy and Metabolism

Joshua D. Rabinowitz et al.

SCIENCE (2010)

Article Biochemistry & Molecular Biology

Ammonia Derived from Glutaminolysis Is a Diffusible Regulator of Autophagy

Christina H. Eng et al.

SCIENCE SIGNALING (2010)

Review Genetics & Heredity

Regulation Mechanisms and Signaling Pathways of Autophagy

Congcong He et al.

ANNUAL REVIEW OF GENETICS (2009)

Article Oncology

CDC25B Mediates Rapamycin-induced Oncogenic Responses in Cancer Cells

Run-qiang Chen et al.

CANCER RESEARCH (2009)

Article Cell Biology

Induction of autophagy by spermidine promotes longevity

Tobias Eisenberg et al.

NATURE CELL BIOLOGY (2009)

Article Biochemical Research Methods

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

Da Wei Huang et al.

NATURE PROTOCOLS (2009)

Article Pharmacology & Pharmacy

Global and Site-Specific Quantitative Phosphoproteomics: Principles and Applications

Boris Macek et al.

Annual Review of Pharmacology and Toxicology (2008)

Article Biochemistry & Molecular Biology

Mitochondrial autophagy is an HIF-1-dependent adaptive metabolic response to hypoxia

Huafeng Zhang et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2008)

Article Biochemical Research Methods

Ordered Organelle Degradation during Starvation-induced Autophagy

Anders Riis Kristensen et al.

MOLECULAR & CELLULAR PROTEOMICS (2008)

Article Multidisciplinary Sciences

A role for the NAD-dependent deacetylase Sirt1 in the regulation of autophagy

In Hye Lee et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Biochemistry & Molecular Biology

Linear Motif Atlas for Phosphorylation-Dependent Signaling

Martin Lee Miller et al.

SCIENCE SIGNALING (2008)

Article Biochemistry & Molecular Biology

Oxidative stress induces autophagic cell death independent of apoptosis in transformed and cancer cells

Y. Chen et al.

CELL DEATH AND DIFFERENTIATION (2008)

Article Biochemical Research Methods

Clustal W and clustal X version 2.0

M. A. Larkin et al.

BIOINFORMATICS (2007)

Review Cell Biology

Autophagy: from phenomenology to molecular understanding in less than a decade

Daniel J. Klionsky

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2007)

Article Biochemical Research Methods

Assessing bias in experiment design for large scale mass spectrometry-based quantitative proteomics

Amol Prakash et al.

MOLECULAR & CELLULAR PROTEOMICS (2007)

Article Biochemistry & Molecular Biology

Systematic discovery of in vivo phosphorylation networks

Rune Linding et al.

Article Biochemical Research Methods

Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation

Ivica Letunic et al.

BIOINFORMATICS (2007)

Article Biochemistry & Molecular Biology

Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

Jesper V. Olsen et al.

Article Biotechnology & Applied Microbiology

An iterative statistical approach to the identification of protein phosphorylation motifs from large-scale data sets

D Schwartz et al.

NATURE BIOTECHNOLOGY (2005)

Article Biochemistry & Molecular Biology

Phosphorylation of serine 13 is required for the proper function of the Hsp90 co-chaperone, Cdc37

JY Shao et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2003)