期刊
BIOINFORMATICS
卷 20, 期 13, 页码 2156-2158出版社
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/bth215
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资金
- NCI NIH HHS [P30 CA023074] Funding Source: Medline
We have developed a web-based system (Pathway Miner) for visualizing gene expression profiles in the context of biological pathways. Pathway Miner catalogs genes based on their role in metabolic, cellular and regulatory pathways. A Fisher exact test is provided as an option to rank pathways. The genes are mapped onto pathways and gene product association networks are extracted for genes that co-occur in pathways. The networks can be filtered for analysis based on user-selected options.
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