4.3 Article

Peeling phylogenetic 'oranges'

期刊

ADVANCES IN APPLIED MATHEMATICS
卷 33, 期 4, 页码 710-727

出版社

ACADEMIC PRESS INC ELSEVIER SCIENCE
DOI: 10.1016/j.aam.2004.03.003

关键词

trees; forests; partitions; poser; contractibility

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We investigate the combinatorics of a topological space that is generated by the set of edge-weighted finite trees. This space arises by multiplying the weights of edges on paths in trees and is closely connected to tree reconstruction problems involving finite state Markov processes. We show that this space is a contractible finite CW-complex whose face poset can be described via a partial order on semilabelled forests. We then describe some combinatorial properties of this poset, showing that, for example, it is pure, thin and contractible. (C) 2004 Elsevier Inc. All rights reserved.

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