期刊
BIOINFORMATICS
卷 20, 期 17, 页码 3246-3248出版社
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/bth349
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资金
- NHGRI NIH HHS [5 T32 HG00044, HG 01315] Funding Source: Medline
- NIGMS NIH HHS [GM46406] Funding Source: Medline
Open source software encourages innovation by allowing users to extend the functionality of existing applications. Treeview is a popular application for the visualization of microarray data, but is closed-source and platform-specific, which limits both its current utility and suitability as a platform for further development. Java Treeview is an open-source, cross-platform rewrite that handles very large datasets well, and supports extensions to the file format that allow the results of additional analysis to be visualized and compared. The combination of a general file format and open source makes Java Treeview an attractive choice for solving a class of visualization problems. An applet version is also available that can be used on any website with no special server-side setup.
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