相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Genomic and proteomic characterization of Candidatus Nitrosopelagicus brevis: An ammonia-oxidizing archaeon from the open ocean
Alyson E. Santoro et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
A receptor-binding protein of Campylobacter jejuni bacteriophage NCTC 12673 recognizes flagellin glycosylated with acetamidino-modified pseudaminic acid
Muhammad Afzal Javed et al.
MOLECULAR MICROBIOLOGY (2015)
Urea Uptake and Carbon Fixation by Marine Pelagic Bacteria and Archaea during the Arctic Summer and Winter Seasons
Tara L. Connelly et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2014)
Pangenome Evidence for Extensive Interdomain Horizontal Transfer Affecting Lineage CoreandShell Genes in Uncultured Planktonic Thaumarchaeota and Euryarchaeota
Philippe Deschamps et al.
GENOME BIOLOGY AND EVOLUTION (2014)
Nitrososphaera viennensis gen. nov., sp nov., an aerobic and mesophilic, ammonia-oxidizing archaeon from soil and a member of the archaeal phylum Thaumarchaeota
Michaela Stieglmeier et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
Mincheol Kim et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
Single-cell genomics shedding light on marine Thaumarchaeota diversification
Haiwei Luo et al.
ISME JOURNAL (2014)
Explaining microbial genomic diversity in light of evolutionary ecology
Otto X. Cordero et al.
NATURE REVIEWS MICROBIOLOGY (2014)
Genomes of Two New Ammonia-Oxidizing Archaea Enriched from Deep Marine Sediments
Soo-Je Park et al.
PLOS ONE (2014)
Competition-dispersal tradeoff ecologically differentiates recently speciated marine bacterioplankton populations
Yutaka Yawata et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Ammonia-oxidizing archaea use the most energy-efficient aerobic pathway for CO2 fixation
Martin Koenneke et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Marine ammonia-oxidizing archaeal isolates display obligate mixotrophy and wide ecotypic variation
Wei Qin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Strucutral conservation of the B subunit in the ammonia monooxygenease/particluate methane monooxygenase superfamily
Thomas J. Lawton et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2014)
Variability of the transporter gene complement in ammonia-oxidizing archaea
Pierre Offre et al.
TRENDS IN MICROBIOLOGY (2014)
Archaeal amoA gene diversity points to distinct biogeography of ammonia-oxidizing Crenarchaeota in the ocean
Eva Sintes et al.
ENVIRONMENTAL MICROBIOLOGY (2013)
Responses of the terrestrial ammonia-oxidizing archaeon Ca. Nitrososphaera viennensis and the ammonia-oxidizing bacterium Nitrosospira multiformis to nitrification inhibitors
Tianlin Shen et al.
FEMS MICROBIOLOGY LETTERS (2013)
Accurate and universal delineation of prokaryotic species
Daniel R. Mende et al.
NATURE METHODS (2013)
MicroScope-an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data
David Vallenet et al.
NUCLEIC ACIDS RESEARCH (2013)
Enrichment and Genome Sequence of the Group I. 1a Ammonia-Oxidizing Archaeon Ca. Nitrosotenuis uzonensis Representing a Clade Globally Distributed in Thermal Habitats
Elena V. Lebedeva et al.
PLOS ONE (2013)
Physiology and Diversity of Ammonia-Oxidizing Archaea
David A. Stahl et al.
ANNUAL REVIEW OF MICROBIOLOGY, VOL 66 (2012)
Architecture and active site of particulate methane monooxygenase
Megen A. Culpepper et al.
CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY (2012)
The genome of the ammonia-oxidizing Candidatus Nitrososphaera gargensis: insights into metabolic versatility and environmental adaptations
Anja Spang et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, Candidatus Nitrosopumilus sediminis AR2, from Svalbard in the Arctic Circle
Soo-Je Park et al.
JOURNAL OF BACTERIOLOGY (2012)
Genome Sequence of Candidatus Nitrosopumilus salaria BD31, an Ammonia-Oxidizing Archaeon from the San Francisco Bay Estuary
Annika C. Mosier et al.
JOURNAL OF BACTERIOLOGY (2012)
Ecophysiology of an Ammonia-Oxidizing Archaeon Adapted to Low-Salinity Habitats
Annika C. Mosier et al.
MICROBIAL ECOLOGY (2012)
Role for urea in nitrification by polar marine Archaea
Laura Alonso-Saez et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation
James I. Prosser et al.
TRENDS IN MICROBIOLOGY (2012)
Quality control and preprocessing of metagenomic datasets
Robert Schmieder et al.
BIOINFORMATICS (2011)
Co-occurrence patterns for abundant marine archaeal and bacterial lineages in the deep chlorophyll maximum of coastal California
J. Michael Beman et al.
ISME JOURNAL (2011)
Complete-fosmid and fosmid-end sequences reveal frequent horizontal gene transfers in marine uncultured planktonic archaea
Celine Brochier-Armanet et al.
ISME JOURNAL (2011)
Genome of a Low-Salinity Ammonia-Oxidizing Archaeon Determined by Single-Cell and Metagenomic Analysis
Paul C. Blainey et al.
PLOS ONE (2011)
Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil
Maria Tourna et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
SulfolobusMutants, Generated via PCR Products, Which Lack Putative Enzymes of UV Photoproduct Repair
Cynthia J. Sakofsky et al.
ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL (2011)
Oxidation of methane by a biological dicopper centre
Ramakrishnan Balasubramanian et al.
NATURE (2010)
Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea
C. B. Walker et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota
Anja Spang et al.
TRENDS IN MICROBIOLOGY (2010)
Circos: An information aesthetic for comparative genomics
Martin Krzywinski et al.
GENOME RESEARCH (2009)
Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria
Willm Martens-Habbena et al.
NATURE (2009)
Global occurrence of archaeal amoA genes in terrestrial hot springs
Chuanlun L. Zhang et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Nitrifier genomics and evolution of the nitrogen cycle
Martin G. Klotz et al.
FEMS MICROBIOLOGY LETTERS (2008)
More than a repair enzyme:: Aspergillus nidulans photolyase-like CryA is a regulator of sexual development
Oezguer Bayram et al.
MOLECULAR BIOLOGY OF THE CELL (2008)
Urea distribution and uptake in the Atlantic Ocean between 50 degrees N and 50 degrees S
Stuart C. Painter et al.
MARINE ECOLOGY PROGRESS SERIES (2008)
Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota
Celine Brochier-Armanet et al.
NATURE REVIEWS MICROBIOLOGY (2008)
A 3-hydroxypropionate/4-hydroxybutyrate autotrophic carbon dioxide assimilation pathway in archaea
Ivan A. Berg et al.
SCIENCE (2007)
Molecular diversity of nitrite reductase genes (nirK) in nitrifying bacteria
J. Jason L. Cantera et al.
ENVIRONMENTAL MICROBIOLOGY (2007)
Identification of diverse archaeal proteins with class III signal peptides cleaved by distinct archaeal prepilin peptidases
Zalan Szabo et al.
JOURNAL OF BACTERIOLOGY (2007)
Crystal structure of archaeal photolyase from Sulfolobus tokodaii with two FAD molecules:: Implication of a novel light-harvesting cofactor
Masahiro Fujihashi et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
DNA-DNA hybridization values and their relationship to whole-genome sequence similarities
Johan Goris et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum
Steven J. Hallam et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Distribution and activity of Bacteria and Archaea in the deep water masses of the North Atlantic
Eva Teira et al.
LIMNOLOGY AND OCEANOGRAPHY (2006)
Archaea predominate among ammonia-oxidizing prokaryotes in soils
S. Leininger et al.
NATURE (2006)
Transcriptome of a Nitrosomonas europaea mutant with a disrupted nitrite reductase gene (nirK)
Catherine Mee-Hie Cho et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling
AH Treusch et al.
ENVIRONMENTAL MICROBIOLOGY (2005)
Unusual pathways and enzymes of central carbohydrate metabolism in Archaea
B Siebers et al.
CURRENT OPINION IN MICROBIOLOGY (2005)
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
CA Francis et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Isolation of an autotrophic ammonia-oxidizing marine archaeon
M Könneke et al.
NATURE (2005)
A novel enzyme, citryl-CoA synthetase, catalysing the first step of the citrate cleavage reaction in Hydrogenobacter thermophilus TK-6
M Aoshima et al.
MOLECULAR MICROBIOLOGY (2004)
A novel enzyme, citryl-CoA lyase, catalysing the second step of the citrate cleavage reaction in Hydrogenobacter thermophilus TK-6
M Aoshima et al.
MOLECULAR MICROBIOLOGY (2004)
Diversity in chemotaxis mechanisms among the bacteria and archaea
L Szurmant et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2004)
Comparative analysis of a genome fragment of an uncultivated mesopelagic crenarchaeote reveals multiple horizontal gene transfers
P Lopez-Garcia et al.
ENVIRONMENTAL MICROBIOLOGY (2004)
Oceanicaulis alexandrii gen. nov., sp nov., a novel stalked bacterium isolated from a culture of the dinoflagellate Alexandrium tamarense (Lebour) Balech
C Strompl et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2003)
Diversity of ammonia monooxygenase operon in autotrophic ammonia-oxidizing bacteria
JM Norton et al.
ARCHIVES OF MICROBIOLOGY (2002)
Archaeal dominance in the mesopelagic zone of the Pacific Ocean
MB Karner et al.
NATURE (2001)
Phylogeny of all recognized species of ammonia oxidizers based on comparative 16S rRNA and amoA sequence analysis:: Implications for molecular diversity surveys
U Purkhold et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2000)
分享论文
