相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Interpreting 16S metagenomic data without clustering to achieve sub-OTU resolution
Mikhail Tikhonov et al.
ISME JOURNAL (2015)
Host-specificity among abundant and rare taxa in the sponge microbiome
Julie Reveillaud et al.
ISME JOURNAL (2014)
The rise and fall of methanotrophy following a deepwater oil-well blowout
M. Crespo-Medina et al.
NATURE GEOSCIENCE (2014)
Single-cell genomics reveals features of a Colwellia species that was dominant during the Deepwater Horizon oil spill
Olivia U. Mason et al.
FRONTIERS IN MICROBIOLOGY (2014)
Sewage reflects the distribution of human faecal Lachnospiraceae
Sandra L. McLellan et al.
ENVIRONMENTAL MICROBIOLOGY (2013)
Microbial communities in the subglacial waters of the Vatnajokull ice cap, Iceland
Viggo Thor Marteinsson et al.
ISME JOURNAL (2013)
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Christian Quast et al.
NUCLEIC ACIDS RESEARCH (2013)
Oligotyping: differentiating between closely related microbial taxa using 16S rRNA gene data
A. Murat Eren et al.
METHODS IN ECOLOGY AND EVOLUTION (2013)
Deep-sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill
Jacob Baelum et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Distribution and in situ abundance of sulfate-reducing bacteria in diverse marine hydrocarbon seep sediments
Sara Kleindienst et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Alteromonas As a Key Agent of Polycyclic Aromatic Hydrocarbon Biodegradation in Crude Oil-Contaminated Coastal Sediment
Hyun Mi Jin et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2012)
Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
Olivia U. Mason et al.
ISME JOURNAL (2012)
Complete Genome Sequence of the Pyrene-Degrading Bacterium Cycloclasticus sp Strain P1
Qiliang Lai et al.
JOURNAL OF BACTERIOLOGY (2012)
Comparative Genomics Reveals Adaptation by Alteromonas sp SN2 to Marine Tidal-Flat Conditions: Cold Tolerance and Aromatic Hydrocarbon Metabolism
Renukaradhya K. Math et al.
PLOS ONE (2012)
Composition and fate of gas and oil released to the water column during the Deepwater Horizon oil spill
Christopher M. Reddy et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Review of flow rate estimates of the Deepwater Horizon oil spill
Marcia K. McNutt et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Natural gas and temperature structured a microbial community response to the Deepwater Horizon oil spill
Molly C. Redmond et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Dynamic autoinoculation and the microbial ecology of a deep water hydrocarbon irruption
David L. Valentine et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Fate of Dispersants Associated with the Deepwater Horizon Oil Spill
Elizabeth B. Kujawinski et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2011)
Weak coupling between sulfate reduction and the anaerobic oxidation of methane in methane-rich seafloor sediments during ex situ incubation
Marshall W. Bowles et al.
GEOCHIMICA ET COSMOCHIMICA ACTA (2011)
Formation dynamics of subsurface hydrocarbon intrusions following the Deepwater Horizon blowout
Scott A. Socolofsky et al.
GEOPHYSICAL RESEARCH LETTERS (2011)
Magnitude and oxidation potential of hydrocarbon gases released from the BP oil well blowout
Samantha B. Joye et al.
NATURE GEOSCIENCE (2011)
Energy Starved Candidatus Pelagibacter Ubique Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration
Laura Steindler et al.
PLOS ONE (2011)
Exploring the Diversity of Gardnerella vaginalis in the Genitourinary Tract Microbiota of Monogamous Couples Through Subtle Nucleotide Variation
A. Murat Eren et al.
PLOS ONE (2011)
Comment on A Persistent Oxygen Anomaly Reveals the Fate of Spilled Methane in the Deep Gulf of Mexico
Samantha B. Joye et al.
SCIENCE (2011)
A Persistent Oxygen Anomaly Reveals the Fate of Spilled Methane in the Deep Gulf of Mexico
John D. Kessler et al.
SCIENCE (2011)
Potential for Chemolithoautotrophy Among Ubiquitous Bacteria Lineages in the Dark Ocean
Brandon K. Swan et al.
SCIENCE (2011)
Search and clustering orders of magnitude faster than BLAST
Robert C. Edgar
BIOINFORMATICS (2010)
Cold-seep carbonates of the middle and lower continental slope, northern Gulf of Mexico
Harry H. Roberts et al.
DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY (2010)
Impact of natural oil and higher hydrocarbons on microbial diversity, distribution, and activity in Gulf of Mexico cold-seep sediments
Beth N. Orcutt et al.
DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY (2010)
Biogeochemical signatures and microbial activity of different cold-seep habitats along the Gulf of Mexico deep slope
Samantha B. Joye et al.
DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY (2010)
Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates
Victor Kunin et al.
ENVIRONMENTAL MICROBIOLOGY (2010)
Ironing out the wrinkles in the rare biosphere through improved OTU clustering
Susan M. Huse et al.
ENVIRONMENTAL MICROBIOLOGY (2010)
Characterization of subsurface polycyclic aromatic hydrocarbons at the Deepwater Horizon site
Arne-R. Diercks et al.
GEOPHYSICAL RESEARCH LETTERS (2010)
Spatial Structure and Activity of Sedimentary Microbial Communities Underlying a Beggiatoa spp. Mat in a Gulf of Mexico Hydrocarbon Seep
Karen G. Lloyd et al.
PLOS ONE (2010)
Tracking Hydrocarbon Plume Transport and Biodegradation at Deepwater Horizon
Richard Camilli et al.
SCIENCE (2010)
Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria
Terry C. Hazen et al.
SCIENCE (2010)
Propane Respiration Jump-Starts Microbial Response to a Deep Oil Spill
David L. Valentine et al.
SCIENCE (2010)
Dynamics of the SAR11 bacterioplankton lineage in relation to environmental conditions in the oligotrophic North Pacific subtropical gyre
Alexander Eiler et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Growth rates of different phylogenetic bacterioplankton groups in a coastal upwelling system
Eva Teira et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2009)
Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing
Susan M. Huse et al.
PLOS GENETICS (2008)
SILVA:: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
Elmar Pruesse et al.
NUCLEIC ACIDS RESEARCH (2007)
Impacts of Hurricanes Katrina and Rita on the microbial landscape of the New Orleans area
C. D. Sinigalliano et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
The bacterial species definition in the genomic era
Konstantinos T. Konstantinidis et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2006)
Isolation and characterization of Pseudoalteromonas strains with divergent polycyclic aromatic hydrocarbon catabolic properties
BP Hedlund et al.
ENVIRONMENTAL MICROBIOLOGY (2006)
Genome streamlining in a cosmopolitan oceanic bacterium
SJ Giovannoni et al.
SCIENCE (2005)
Aerobic methane oxidation and methanotroph community composition during seasonal stratification in Mono Lake, California (USA)
S Carini et al.
ENVIRONMENTAL MICROBIOLOGY (2005)
Genomic insights that advance the species definition for prokaryotes
KT Konstantinidis et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Molecular biogeochemistry of sulfate reduction, methanogenesis and the anaerobic oxidation of methane at Gulf of Mexico cold seeps
B Orcutt et al.
GEOCHIMICA ET COSMOCHIMICA ACTA (2005)
ARB:: a software environment for sequence data
W Ludwig et al.
NUCLEIC ACIDS RESEARCH (2004)
The anaerobic oxidation of methane and sulfate reduction in sediments from Gulf of Mexico cold seeps
SB Joye et al.
CHEMICAL GEOLOGY (2004)
SAR11 clade dominates ocean surface bacterioplankton communities
RM Morris et al.
NATURE (2002)