期刊
JOURNAL OF COMPUTATIONAL BIOLOGY
卷 12, 期 7, 页码 928-942出版社
MARY ANN LIEBERT, INC
DOI: 10.1089/cmb.2005.12.928
关键词
tandem repeats; ATRhunter; TRF; teiresias; ATR; pattern discovery; DNA repeats; DNA satellites
An efficient algorithm is presented for detecting approximate tandem repeats in genomic sequences. The algorithm is based on a flexible statistical model which allows a wide range of definitions of approximate tandem repeats. The ideas and methods underlying the algorithm are described and its effectiveness on genomic data is demonstrated.
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