相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Proteoform: a single term describing protein complexity
Lloyd M. Smith et al.
NATURE METHODS (2013)
Proteomic characterization of novel histone post-translational modifications
Anna M. Arnaudo et al.
EPIGENETICS & CHROMATIN (2013)
Targeted Data Extraction of the MS/MS Spectra Generated by Data-independent Acquisition: A New Concept for Consistent and Accurate Proteome Analysis
Ludovic C. Gillet et al.
MOLECULAR & CELLULAR PROTEOMICS (2012)
Determination of monoisotopic masses of chimera spectra from high-resolution mass spectrometric data by use of isotopic peak intensity ratio modeling
Ming Niu et al.
RAPID COMMUNICATIONS IN MASS SPECTROMETRY (2012)
pParse: A method for accurate determination of monoisotopic peaks in high-resolution mass spectra
Zuo-Fei Yuan et al.
PROTEOMICS (2012)
Identification of 67 Histone Marks and Histone Lysine Crotonylation as a New Type of Histone Modification
Minjia Tan et al.
CELL (2011)
Revealing histone variant induced changes via quantitative proteomics
Anna M. Arnaudo et al.
CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY (2011)
Breaking the histone code with quantitative mass spectrometry
Laura-Mae P. Britton et al.
EXPERT REVIEW OF PROTEOMICS (2011)
DeltAMT: A Statistical Algorithm for Fast Detection of Protein Modifications From LC-MS/MS Data
Yan Fu et al.
MOLECULAR & CELLULAR PROTEOMICS (2011)
Peptidylarginine deiminase 4 and citrullination in health and disease
Consuelo Anzilotti et al.
AUTOIMMUNITY REVIEWS (2010)
Open MS/MS spectral library search to identify unanticipated post-translational modifications and increase spectral identification rate
Ding Ye et al.
BIOINFORMATICS (2010)
PepC: proteomics software for identifying differentially expressed proteins based on spectral counting
N. L. Heinecke et al.
BIOINFORMATICS (2010)
Role of spectral counting in quantitative proteomics
Deborah H. Lundgren et al.
EXPERT REVIEW OF PROTEOMICS (2010)
Quantifying the Impact of Chimera MS/MS Spectra on Peptide Identification in Large-Scale Proteomics Studies
Stephane Houel et al.
JOURNAL OF PROTEOME RESEARCH (2010)
A Mixed Integer Linear Optimization Framework for the Identification and Quantification of Targeted Post-translational Modifications of Highly Modified Proteins Using Multiplexed Electron Transfer Dissociation Tandem Mass Spectrometry
Peter A. DiMaggio et al.
MOLECULAR & CELLULAR PROTEOMICS (2009)
The detection, correlation, and comparison of peptide precursor and product ions from data independent LC-MS with data dependant LC-MS/MS
Scott J. Geromanos et al.
PROTEOMICS (2009)
Isotopic peak intensity ratio based algorithm for determination of isotopic clusters and monoisotopic masses of polypeptides from high-resolution mass spectrometric data
Kunsoo Park et al.
ANALYTICAL CHEMISTRY (2008)
Identifying differences in protein expression levels by spectral counting and feature selection
P. C. Carvalho et al.
GENETICS AND MOLECULAR RESEARCH (2008)
The double bromodomain proteins Brd2 and Brd3 couple histone acetylation to transcription
Gary LeRoy et al.
MOLECULAR CELL (2008)
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
Juergen Cox et al.
NATURE BIOTECHNOLOGY (2008)
Analysis and validation of proteomic data generated by tandem mass spectrometry
Alexey I. Nesvizhskii et al.
NATURE METHODS (2007)
High-speed data reduction, feature detection and MS/MS spectrum quality assessment of shotgun proteomics data sets using high-resolution mass Spectrometry
Michael R. Hoopmann et al.
ANALYTICAL CHEMISTRY (2007)
Development and validation of a spectral library searching method for peptide identification from MS/MS
Henry Lam et al.
PROTEOMICS (2007)
Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry
Joshua E. Elias et al.
NATURE METHODS (2007)
Chromatin modifications and their function
Tony Kouzarides
CELL (2007)
Lookup peaks: A hybrid of de novo sequencing and database search for protein identification by tandem mass spectrometry
Marshall Bern et al.
ANALYTICAL CHEMISTRY (2007)
Technical, experimental, and biological variations in isobaric tags for relative and absolute quantitation (iTRAQ)
Chee Sian Gan et al.
JOURNAL OF PROTEOME RESEARCH (2007)
Chemical derivatization of histones for facilitated analysis by mass spectrometry
Benjamin A. Garcia et al.
NATURE PROTOCOLS (2007)
A probability-based approach for high-throughput protein phosphorylation analysis and site localization
Sean A. Beausoleil et al.
NATURE BIOTECHNOLOGY (2006)
Challenges and opportunities in proteomics data analysis
Bruno Domon et al.
MOLECULAR & CELLULAR PROTEOMICS (2006)
Precise characterization of human histories in the H2A gene family by top down mass spectrometry
MT Boyne et al.
JOURNAL OF PROTEOME RESEARCH (2006)
Mass spectrometric characterization of human histone H3: A bird's eye view
CE Thomas et al.
JOURNAL OF PROTEOME RESEARCH (2006)
Gene-specific characterization of human histone H2B by electron capture dissociation
N Siuti et al.
JOURNAL OF PROTEOME RESEARCH (2006)
Modifications of human histone H3 variants during mitosis
BA Garcia et al.
BIOCHEMISTRY (2005)
Open mass spectrometry search algorithm
LY Geer et al.
JOURNAL OF PROTEOME RESEARCH (2004)
Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents
PL Ross et al.
MOLECULAR & CELLULAR PROTEOMICS (2004)
Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry
JEP Syka et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
TANDEM: matching proteins with tandem mass spectra
R Craig et al.
BIOINFORMATICS (2004)
Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra
JD Venable et al.
NATURE METHODS (2004)
A combination of different mass spectroscopic techniques for the analysis of dynamic changes of histone modifications
T Bonaldi et al.
PROTEOMICS (2004)
Novel linear quadrupole ion trap/FT mass spectrometer: Performance characterization and use in the comparative analysis of histone H3 post-translational modifications
JEP Syka et al.
JOURNAL OF PROTEOME RESEARCH (2004)
Mass spectrometric quantification of acetylation at specific lysines within the amino-terminal tail of histone H4
CM Smith et al.
ANALYTICAL BIOCHEMISTRY (2003)
Partitioning and plasticity of repressive histone methylation states in mammalian chromatin
AHFM Peters et al.
MOLECULAR CELL (2003)
PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry
B Ma et al.
RAPID COMMUNICATIONS IN MASS SPECTROMETRY (2003)
Heritable chromatin structure: Mapping memory in histones H3 and H4
CM Smith et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
A Keller et al.
ANALYTICAL CHEMISTRY (2002)
Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
SE Ong et al.
MOLECULAR & CELLULAR PROTEOMICS (2002)
Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins
M Lachner et al.
NATURE (2001)
Automated reduction and interpretation of high resolution electrospray mass spectra of large molecules
DM Horn et al.
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2000)
The language of covalent histone modifications
BD Strahl et al.
NATURE (2000)
分享论文
