4.6 Article

Combined small RNA and degradome sequencing reveals novel miRNAs and their targets in response to low nitrate availability in maize

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Role of miRNAs and siRNAs in biotic and abiotic stress responses of plants

Basel Khraiwesh et al.

BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2012)

Article Biochemistry & Molecular Biology

Cloning and characterization of miRNAs from maize seedling roots under low phosphorus stress

Zhiming Zhang et al.

MOLECULAR BIOLOGY REPORTS (2012)

Review Genetics & Heredity

MicroRNA profiling: approaches and considerations

Colin C. Pritchard et al.

NATURE REVIEWS GENETICS (2012)

Article Biochemistry & Molecular Biology

PsRobot: a web-based plant small RNA meta-analysis toolbox

Hua-Jun Wu et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Multidisciplinary Sciences

MicroRNA Transcriptomic Analysis of Heterosis during Maize Seed Germination

Dong Ding et al.

PLOS ONE (2012)

Review Multidisciplinary Sciences

Systems Biology for Enhanced Plant Nitrogen Nutrition

Rodrigo A. Gutierrez

SCIENCE (2012)

Review Genetics & Heredity

Small RNA sorting: matchmaking for Argonautes

Benjamin Czech et al.

NATURE REVIEWS GENETICS (2011)

Article Biochemistry & Molecular Biology

NCBI GEO: archive for functional genomics data sets-10 years on

Tanya Barrett et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemistry & Molecular Biology

psRNATarget: a plant small RNA target analysis server

Xinbin Dai et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemical Research Methods

Target-align: a tool for plant microRNA target identification

Fuliang Xie et al.

BIOINFORMATICS (2010)

Article Biochemistry & Molecular Biology

siRNAs from miRNA sites mediate DNA methylation of target genes

Padmanabhan Chellappan et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Multidisciplinary Sciences

Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana

Elena A. Vidal et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Multidisciplinary Sciences

Significant Acidification in Major Chinese Croplands

J. H. Guo et al.

SCIENCE (2010)

Article Biochemistry & Molecular Biology

Members of miR-169 family are induced by high salinity and transiently inhibit the NF-YA transcription factor

Botao Zhao et al.

BMC MOLECULAR BIOLOGY (2009)

Review Biochemistry & Molecular Biology

Origin, Biogenesis, and Activity of Plant MicroRNAs

Olivier Voinnet

Article Biochemistry & Molecular Biology

Triggering the formation of tasiRNAs in Arabidopsis thaliana: the role of microRNA miR173

Felipe F. Felippes et al.

EMBO REPORTS (2009)

Article Biochemistry & Molecular Biology

Rfam: updates to the RNA families database

Paul P. Gardner et al.

NUCLEIC ACIDS RESEARCH (2009)

Article Multidisciplinary Sciences

Reducing environmental risk by improving N management in intensive Chinese agricultural systems

Xiao-Tang Ju et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Genetics & Heredity

A Genome-Wide Characterization of MicroRNA Genes in Maize

Lifang Zhang et al.

PLOS GENETICS (2009)

Article Biochemical Research Methods

A toolkit for analysing large-scale plant small RNA datasets

Simon Moxon et al.

BIOINFORMATICS (2008)

Article Biochemistry & Molecular Biology

Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome

Charles Addo-Quaye et al.

CURRENT BIOLOGY (2008)

Article Biotechnology & Applied Microbiology

Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends

Marcelo A. German et al.

NATURE BIOTECHNOLOGY (2008)

Article Biochemical Research Methods

Identification of microRNAs and other small regulatory RNAs using cDNA library sequencing

Markus Hafner et al.

METHODS (2008)

Review Plant Sciences

Gene silencing in plants using artificial microRNAs and other small RNAs

Stephan Ossowski et al.

PLANT JOURNAL (2008)

Article Multidisciplinary Sciences

Distinct size distribution of endogenous siRNAs in maize: Evidence from deep sequencing in the mop1-1 mutant

Kan Nobuta et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Multidisciplinary Sciences

Cell-specific nitrogen responses mediate developmental plasticity

Miriam L. Gifford et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Biochemistry & Molecular Biology

miRBase: tools for microRNA genomics

Sam Griffiths-Jones et al.

NUCLEIC ACIDS RESEARCH (2008)

Review Plant Sciences

Small RNAs as big players in plant abiotic stress responses and nutrient deprivation

Ramanjulu Sunkar et al.

TRENDS IN PLANT SCIENCE (2007)

Article Plant Sciences

Distinct expression patterns of natural antisense transcripts in arabidopsis

Stefan R. Henz et al.

PLANT PHYSIOLOGY (2007)

Article Plant Sciences

The role of microRNAs in sensing nutrient stress

Tzyy-Jen Chiou

PLANT CELL AND ENVIRONMENT (2007)

Article Multidisciplinary Sciences

A pathogen-inducible endogenous siRNA in plant immunity

Surekha Katiyar-Agarwal et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Plant Sciences

PHO2, microRNA399, and PHR1 define a phosphate-signaling pathway in plants

Rajendra Bari et al.

PLANT PHYSIOLOGY (2006)

Article Biochemistry & Molecular Biology

Regulation of phosphate homeostasis by microRNA in Arabidopsis

TJ Chiou et al.

PLANT CELL (2006)

Review Genetics & Heredity

Functions of microRNAs and related small RNAs in plants

Allison C. Mallory et al.

NATURE GENETICS (2006)

Article Biochemistry & Molecular Biology

GenBank

Dennis A. Benson et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Biochemistry & Molecular Biology

A miRNA involved in phosphate-starvation response in Arabidopsis

H Fujii et al.

CURRENT BIOLOGY (2005)

Review Biochemistry & Molecular Biology

MicroRNAs: Genomics, biogenesis, mechanism, and function

DP Bartel

Article Biochemistry & Molecular Biology

Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis

R Sunkar et al.

PLANT CELL (2004)

Article Biochemistry & Molecular Biology

A uniform system for microRNA annotation

V Ambros et al.

Review Multidisciplinary Sciences

Agricultural sustainability and intensive production practices

D Tilman et al.

NATURE (2002)

Article Biochemistry & Molecular Biology

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

R Edgar et al.

NUCLEIC ACIDS RESEARCH (2002)

Article Biochemistry & Molecular Biology

A new mathematical model for relative quantification in real-time RT-PCR

MW Pfaffl

NUCLEIC ACIDS RESEARCH (2001)