期刊
BIOINFORMATICS
卷 23, 期 3, 页码 394-396出版社
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btl605
关键词
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We have implemented a graph layout algorithm that exposes Gene Ontology (GO) class structure on the network nodes. It can be used in conjunction with BiNGO plug-in to Cytoscape, which finds the GO categories over-represented in a given network. Our plug-in, named GOlorize, first highlights the class members with category-specific color-coding and then constructs an enhanced visualization of the network using a class-directed layout algorithm Availability:http://www.cytoscape.org/plugins2.php Contact:teanai@pasteur.fr Supplementary information: Installation instructions and tutorial at http://www.cytoscape.org/plugins/GOlorize/GOlorizeUserGuide.pdf.
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