4.8 Article

Coupling of hydrogenic tunneling to active-site motion in the hydrogen radical transfer catalyzed by a coenzyme B12-dependent mutase

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NATL ACAD SCIENCES
DOI: 10.1073/pnas.0702188104

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enzyme kinetics; kinetic isotope effects; quantum dynamics; molecular modeling; ensemble-averaged variational transition state theory

资金

  1. FIC NIH HHS [R03 TW001212, TW01212-01] Funding Source: Medline
  2. NIDDK NIH HHS [R01 DK045776, DK45776] Funding Source: Medline

向作者/读者索取更多资源

Hydrogen transfer reactions catalyzed by coenzyme B-12-dependent methylmalonyl-CoA mutase have very large kinetic isotope effects, indicating that they proceed by a highly quantal tunneling mechanism. We explain the kinetic isotope effect by using a combined quantum mechanical/molecular mechanical potential and semiclassical quantum dynamics calculations. Multidimensional tunneling increases the magnitude of the calculated intrinsic hydrogen kinetic isotope effect by a factor of 3.6 from 14 to 51, in excellent agreement with experimental results. These calculations confirm that tunneling contributions can be large enough to explain even a kinetic isotope effect > 50, not because the barrier is unusually thin but because corner-cutting tunneling decreases the distance over which the system tunnels without a comparable increase in either the effective potential barrier or the effective mass for tunneling.

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