相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。CysTRAQ - A combination of iTRAQ and enrichment of cysteinyl peptides for uncovering and quantifying hidden proteomes
Vojtech Tambor et al.
JOURNAL OF PROTEOMICS (2012)
Click Chemistry Facilitates Formation of Reporter Ions and Simplified Synthesis of Amine-Reactive Multiplexed Isobaric Tags for Protein Quantification
Chang Ho Sohn et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2012)
Human Alzheimer's disease synaptic O-GlcNAc site mapping and iTRAQ expression proteomics with ion trap mass spectrometry
Yuliya V. Skorobogatko et al.
AMINO ACIDS (2011)
Fragmentation and Site-Specific Quantification of Core Fucosylated Glycoprotein by Multiple Reaction Monitoring-Mass Spectrometry
Yan Zhao et al.
ANALYTICAL CHEMISTRY (2011)
Isobaric Peptide Termini Labeling Utilizing Site-Specific N-Terminal Succinylation
Christian J. Koehler et al.
ANALYTICAL CHEMISTRY (2011)
Impact of Peptide Modifications on the Isobaric Tags for Relative and Absolute Quantitation Method Accuracy
Milagros J. Tenga et al.
ANALYTICAL CHEMISTRY (2011)
Separation of a Set of Peptide Sequence Isomers Using Differential Ion Mobility Spectrometry
Alexandre A. Shvartsburg et al.
ANALYTICAL CHEMISTRY (2011)
Improving N-Glycosylation Efficiency in Escherichia coli Using Shotgun Proteomics, Metabolic Network Analysis, and Selective Reaction Monitoring
Jagroop Pandhal et al.
BIOTECHNOLOGY AND BIOENGINEERING (2011)
Methods in Quantitative Proteomics: Setting iTRAQ on the Right Track
Josselin Noirel et al.
CURRENT PROTEOMICS (2011)
Site-specific analysis of protein S-acylation by resin-assisted capture
Michael T. Forrester et al.
JOURNAL OF LIPID RESEARCH (2011)
Proteomic Analysis of 3T3-L1 Adipocyte Mitochondria during Differentiation and Enlargement
Billy W. Newton et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Electrostatic Repulsion-Hydrophilic Interaction Chromatography (ERLIC) versus Strong Cation Exchange (SCX) for Fractionation of iTRAQ-Labeled Peptides
Piliang Hao et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Proteomic Profiling of Human Plasma by iTRAQ Reveals Down-Regulation of ITI-HC3 and VDBP by Cigarette Smoking
James D. Bortner et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Evaluation of Different Multidimensional LC-MS/MS Pipelines for Isobaric Tags for Relative and Absolute Quantitation (iTRAQ)-Based Proteomic Analysis of Potato Tubers in Response to Cold Storage
Yong Yang et al.
JOURNAL OF PROTEOME RESEARCH (2011)
General Statistical Modeling of Data from Protein Relative Expression Isobaric Tags
Florian P. Breitwieser et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Relative Quantification: Characterization of Bias, Variability and Fold Changes in Mass Spectrometry Data from iTRAQ-Labeled Peptides
Douglas W. Mahoney et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Quantitative Analysis of Human Cerebrospinal Fluid Proteins Using a Combination of Cysteine Tagging and Amine-Reactive Isobaric Labeling
Priscille Giron et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Proteomic analysis of human cataract aqueous humour: Comparison of one-dimensional gel LCMS with two-dimensional LCMS of unlabelled and iTRAQ®-labelled specimens
Keiryn L. Bennett et al.
JOURNAL OF PROTEOMICS (2011)
Proteomic comparison of colorectal tumours and non-neoplastic mucosa from paired patient samples using iTRAQ mass spectrometry
Lucy Jankova et al.
MOLECULAR BIOSYSTEMS (2011)
Differential expression of serine-threonine kinase receptor-associated protein in patients with systemic lupus erythematosus
L. Wang et al.
LUPUS (2011)
Global quantification of mammalian gene expression control
Bjoern Schwanhaeusser et al.
NATURE (2011)
Taming the isobaric tagging elephant in the room in quantitative proteomics
Andy Christoforou et al.
NATURE METHODS (2011)
Gas-phase purification enables accurate, multiplexed proteome quantification with isobaric tagging
Craig D. Wenger et al.
NATURE METHODS (2011)
MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics
Lily Ting et al.
NATURE METHODS (2011)
Identifying and quantifying proteolytic events and the natural N terminome by terminal amine isotopic labeling of substrates
Oded Kleifeld et al.
NATURE PROTOCOLS (2011)
Quantification of proteins using data-independent analysis (MSE) in simple and complex samples: A systematic evaluation
Yishai Levin et al.
PROTEOMICS (2011)
Minimising iTRAQ ratio compression through understanding LC-MS elution dependence and high-resolution HILIC fractionation
Saw Yen Ow et al.
PROTEOMICS (2011)
Less label, more free: Approaches in label-free quantitative mass spectrometry
Karlie A. Neilson et al.
PROTEOMICS (2011)
Quantitative proteomic analysis of cold-responsive proteins in rice
Karlie A. Neilson et al.
PROTEOMICS (2011)
Gaining efficiency by parallel quantification and identification of iTRAQ-labeled peptides using HCD and decision tree guided CID/ETD on an LTQ Orbitrap
Nikolai Mischerikow et al.
ANALYST (2010)
Peptide Labeling with Isobaric Tags Yields Higher Identification Rates Using iTRAQ 4-Plex Compared to TMT 6-Plex and iTRAQ 8-Plex on LTQ Orbitrap
Peter Pichler et al.
ANALYTICAL CHEMISTRY (2010)
Direct Comparison of Stable Isotope Labeling by Amino Acids in Cell Culture and Spectral Counting for Quantitative Proteomics
Timothy S. Collier et al.
ANALYTICAL CHEMISTRY (2010)
Methods for combining peptide intensities to estimate relative protein abundance
Brian Carrillo et al.
BIOINFORMATICS (2010)
Prophossi: automating expert validation of phosphopeptide-spectrum matches from tandem mass spectrometry
David M. A. Martin et al.
BIOINFORMATICS (2010)
Ocular Proteomics with Emphasis on Two-Dimensional Gel Electrophoresis and Mass Spectrometry
Nakul Mandal et al.
BIOLOGICAL PROCEDURES ONLINE (2010)
Isobaric protein and peptide quantification: perspectives and issues
Achim Treumann et al.
EXPERT REVIEW OF PROTEOMICS (2010)
Quantitative Analysis of Protein Complex Constituents and Their Phosphorylation States on a LTQ-Orbitrap Instrument
Cedric Przybylski et al.
JOURNAL OF PROTEOME RESEARCH (2010)
Differential Phosphorylation of Dynamin I Isoforms in Subcellular Compartments Demonstrates the Hidden Complexity of Phosphoproteomes
Ling-Shan Chan et al.
JOURNAL OF PROTEOME RESEARCH (2010)
Quantifying the Impact of Chimera MS/MS Spectra on Peptide Identification in Large-Scale Proteomics Studies
Stephane Houel et al.
JOURNAL OF PROTEOME RESEARCH (2010)
Discovery of Novel Bladder Cancer Biomarkers by Comparative Urine Proteomics Using iTRAQ Technology
Yi-Ting Chen et al.
JOURNAL OF PROTEOME RESEARCH (2010)
Undesirable Charge-Enhancement of Isobaric Tagged Phosphopeptides Leads to Reduced Identification Efficiency
Tine E. Thingholm et al.
JOURNAL OF PROTEOME RESEARCH (2010)
Combining low- and high-energy tandem mass spectra for optimized peptide quantification with isobaric tags
Loic Dayon et al.
JOURNAL OF PROTEOMICS (2010)
Label-free Relative Quantification of Co-eluting Isobaric Phosphopeptides of Insulin Receptor Substrate-1 by HPLC-ESI-MS/MS
Paul Langlais et al.
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2010)
Targeted Data Acquisition for Improved Reproducibility and Robustness of Proteomic Mass Spectrometry Assays
Mikhail M. Savitski et al.
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2010)
A Robust Error Model for iTRAQ Quantification Reveals Divergent Signaling between Oncogenic FLT3 Mutants in Acute Myeloid Leukemia
Yi Zhang et al.
MOLECULAR & CELLULAR PROTEOMICS (2010)
Development of Serum Glycoproteomic Profiling Technique; Simultaneous Identification of Glycosylation Sites and Site-Specific Quantification of Glycan Structure Changes
Koji Ueda et al.
MOLECULAR & CELLULAR PROTEOMICS (2010)
Multiplex N-terminome Analysis of MMP-2 and MMP-9 Substrate Degradomes by iTRAQ-TAILS Quantitative Proteomics
Anna Prudova et al.
MOLECULAR & CELLULAR PROTEOMICS (2010)
Addressing Accuracy and Precision Issues in iTRAQ Quantitation
Natasha A. Karp et al.
MOLECULAR & CELLULAR PROTEOMICS (2010)
Proteomic Studies on the Development of the Central Nervous System and Beyond
Chenggang Zhang
NEUROCHEMICAL RESEARCH (2010)
iTRAQ-based quantitative analysis of protein mixtures with large fold change and dynamic range
Juan Casado-Vela et al.
PROTEOMICS (2010)
Integrating titania enrichment, iTRAQ labeling, and Orbitrap CID-HCD for global identification and quantitative analysis of phosphopeptides
Jiang Wu et al.
PROTEOMICS (2010)
Balancing robust quantification and identification for iTRAQ: Application of UHR-ToF MS
Saw Yen Ow et al.
PROTEOMICS (2010)
Study of monocyte membrane proteome perturbation during lipopolysaccharide-induced tolerance using iTRAQ-based quantitative proteomic approach
Huoming Zhang et al.
PROTEOMICS (2010)
A quantitative proteomic analysis of biofilm adaptation by the periodontal pathogen Tannerella forsythia
Trong Khoa Pham et al.
PROTEOMICS (2010)
Shotgun proteome analysis utilising mixed mode (reversed phase-anion exchange chromatography) in conjunction with reversed phase liquid chromatography mass spectrometry analysis
Helen L. Phillips et al.
PROTEOMICS (2010)
Peptide Quantification Using 8-Plex Isobaric Tags and Electron Transfer Dissociation Tandem Mass Spectrometry
Doug Phanstiel et al.
ANALYTICAL CHEMISTRY (2009)
Absolute Quantification of Potential Cancer Markers in Clinical Tissue Homogenates Using Multiple Reaction Monitoring on a Hybrid Triple Quadrupole/Linear Ion Trap Tandem Mass Spectrometer
Leroi V. DeSouza et al.
ANALYTICAL CHEMISTRY (2009)
MS-specific noise model reveals the potential of iTRAQ in quantitative proteomics
C. Hundertmark et al.
BIOINFORMATICS (2009)
iQuantitator: A tool for protein expression inference using iTRAQ
John H. Schwacke et al.
BMC BIOINFORMATICS (2009)
High Precision Quantitative Proteomics Using iTRAQ on an LTQ Orbitrap: A New Mass Spectrometric Method Combining the Benefits of All
Thomas Koecher et al.
JOURNAL OF PROTEOME RESEARCH (2009)
A Comparison of Labeling and Label-Free Mass Spectrometry-Based Proteomics Approaches
Vibhuti J. Patel et al.
JOURNAL OF PROTEOME RESEARCH (2009)
iTRAQ Underestimation in Simple and Complex Mixtures: The Good, the Bad and the Ugly
Saw Yen Ow et al.
JOURNAL OF PROTEOME RESEARCH (2009)
Proteomic analysis of S-nitrosylation and denitrosylation by resin-assisted capture
Michael T. Forrester et al.
NATURE BIOTECHNOLOGY (2009)
A comparison of MS/MS-based, stable-isotope-labeled, quantitation performance on ESI-quadrupole TOF and MALDI-TOF/TOF mass spectrometers
Michael A. Kuzyk et al.
PROTEOMICS (2009)
Quantitative identification of protein nitration sites
Giovanni Chiappetta et al.
PROTEOMICS (2009)
Database searching and accounting of multiplexed precursor and product ion spectra from the data independent analysis of simple and complex peptide mixtures
Guo-Zhong Li et al.
PROTEOMICS (2009)
Lysine Acetylation Targets Protein Complexes and Co-Regulates Major Cellular Functions
Chunaram Choudhary et al.
SCIENCE (2009)
A statistical model for iTRAQ data analysis
Elizabeth G. Hill et al.
JOURNAL OF PROTEOME RESEARCH (2008)
Electron transfer dissociation of iTRAQ labeled peptide ions
Hongling Han et al.
JOURNAL OF PROTEOME RESEARCH (2008)
Multiple reaction monitoring of mTRAQ-labeled peptides enables absolute quantification of endogenous levels of a potential cancer marker in cancerous and normal endometrial tissues
Leroi V. DeSouza et al.
JOURNAL OF PROTEOME RESEARCH (2008)
Quantitative shotgun proteomics of enriched heterocysts from Nostoc sp.: PCC 7120 using 8-plex isobaric peptide tags
Saw Yen Ow et al.
JOURNAL OF PROTEOME RESEARCH (2008)
iTRAQ - Facilitated proteomic analysis of human prostate cancer cells identifies proteins associated with progression
Adam Glen et al.
JOURNAL OF PROTEOME RESEARCH (2008)
Statistical analysis of relative labeled mass spectrometry data from complex samples using ANOVA
Ann L. Oberg et al.
JOURNAL OF PROTEOME RESEARCH (2008)
Characterization of global yeast quantitative proteome data generated from the wild-type and glucose repression Saccharomyces cerevisiae strains: The comparison of two quantitative methods
Renata Usaite et al.
JOURNAL OF PROTEOME RESEARCH (2008)
Robust and sensitive iTRAQ quantification on an LTQ orbitrap mass spectrometer
Marcus Bantscheff et al.
MOLECULAR & CELLULAR PROTEOMICS (2008)
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
Juergen Cox et al.
NATURE BIOTECHNOLOGY (2008)
Post-translational modification of cellular proteins during Leishmania donovani differentiation
Doron Rosenzweig et al.
PROTEOMICS (2008)
Eight-channel iTRAQ enables comparison of the activity of six leukemogenic tyrosine kinases
Andrew Pierce et al.
MOLECULAR & CELLULAR PROTEOMICS (2008)
iTRAQ reagent-based quantitative proteomic analysis on a linear ion trap mass spectrometer
Timothy J. Griffin et al.
JOURNAL OF PROTEOME RESEARCH (2007)
Quantitative mass spectrometry in proteomics: a critical review
Marcus Bantscheff et al.
ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2007)
8-Plex quantitation of changes in cerebrospinal fluid protein expression in subjects undergoing intravenous immunoglobulin treatment for Alzheimer's disease
Leila Choe et al.
PROTEOMICS (2007)
Higher-energy C-trap dissociation for peptide modification analysis
Jesper V. Olsen et al.
NATURE METHODS (2007)
Precise protein quantification based on peptide quantification using iTRAQ™
Andreas M. Boehm et al.
BMC BIOINFORMATICS (2007)
Technical, experimental, and biological variations in isobaric tags for relative and absolute quantitation (iTRAQ)
Chee Sian Gan et al.
JOURNAL OF PROTEOME RESEARCH (2007)
Global, in vivo, and site-specific phosphorylation dynamics in signaling networks
Jesper V. Olsen et al.
CELL (2006)
Multi-Q: A fully automated tool for multiplexed protein quantitation
Wen-Ting Lin et al.
JOURNAL OF PROTEOME RESEARCH (2006)
Differential protein expression profiling by iTRAO-2DLC-MS/MS of lung cancer cells undergoing epithelial-mesenchymal transition reveals a migratory/invasive phenotype
VG Keshamouni et al.
JOURNAL OF PROTEOME RESEARCH (2006)
Isobaric tags for relative and absolute quantitation (iTRAQ) reproducibility: Implication of multiple injections
PK Chong et al.
JOURNAL OF PROTEOME RESEARCH (2006)
A perspective on the use of iTRAQ™ reagent technology for protein complex and profiling studies
LR Zieske
JOURNAL OF EXPERIMENTAL BOTANY (2006)
Mass spectrometry-based proteomics turns quantitative
SE Ong et al.
NATURE CHEMICAL BIOLOGY (2005)
Comparison of protein and peptide prefractionation methods for the shotgun proteomic analysis of Synechocystis sp PCC 6803
CS Gan et al.
PROTEOMICS (2005)
A comparison of the consistency of proteome quantitation using two-dimensional electrophoresis and shotgun isobaric tagging in Escherichia coli cells
LH Choe et al.
ELECTROPHORESIS (2005)
Proteomics principles and challenges
G Marko-Varga
PURE AND APPLIED CHEMISTRY (2004)
Fragmentation pathways of NG-methylated and unmodified arginine residues in peptides studied by ESI-MS/MS and MALDI-MS
PM Gehrig et al.
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2004)
Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents
PL Ross et al.
MOLECULAR & CELLULAR PROTEOMICS (2004)
Tandem mass tags:: A novel quantification strategy for comparative analysis of complex protein mixtures by MS/MS
A Thompson et al.
ANALYTICAL CHEMISTRY (2003)
A mass spectrometry-based proteomic approach for identification of serine/threonine-phosphorylated proteins by enrichment with phospho-specific antibodies - Identification of a novel protein, Frigg, as a protein kinase A substrate
M Gronborg et al.
MOLECULAR & CELLULAR PROTEOMICS (2002)
Analysis of receptor signaling pathways by mass spectrometry: Identification of Vav-2 as a substrate of the epidermal and platelet-derived growth factor receptors
A Pandey et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)