4.8 Article

High-resolution timing of cell cycle-regulated gene expression

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NATL ACAD SCIENCES
DOI: 10.1073/pnas.0706022104

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mitosis; microarrays; yeast; maximum entropy

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  1. NIGMS NIH HHS [GM 74942, U54 GM074942] Funding Source: Medline

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The eukaryotic cell division cycle depends on an intricate sequence of transcriptional events. Using an algorithm based on maximum-entropy deconvolution, and expression data from a highly synchronized yeast culture, we have timed the peaks of expression of transcriptionally regulated cell cycle genes to an accuracy of 2 min (approximate to l% of the cell cycle time). The set of 1,129 cell cycle-regulated genes was identified by a comprehensive analysis encompassing all available cell cycle yeast data sets. Our results reveal distinct subphases of the cell cycle undetectable by morphological observation, as well as the precise timeline of macromolecular complex assembly during key cell cycle events.

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