期刊
AMINO ACIDS
卷 43, 期 4, 页码 1451-1464出版社
SPRINGER WIEN
DOI: 10.1007/s00726-012-1218-x
关键词
A(2A)R; D2R; Kinetic constant; Dimer; Parkinson's disease
资金
- Council of Scientific and Industrial Research, Delhi, India
G-protein-coupled receptors (GPCRs) are cell surface receptors. The dynamic property of receptor-receptor interactions in GPCRs modulates the kinetics of G-protein signaling and stability. In the present work, the structural and dynamic study of A(2A)R-D2R interactions was carried to acquire the understanding of the A(2A)R-D2R receptor activation and deactivation process, facilitating the design of novel drugs and therapeutic target for Parkinson's disease. The structure-based features (Alpha, Beta, SurfAlpha, and SurfBeta; GapIndex, Leakiness and Gap Volume) and slow mode model (ENM) facilitated the prediction of kinetics (K (off), K (on), and K (d)) of A(2A)R-D2R interactions. The results demonstrated the correlation coefficient 0.294 for K (d) and K (on) and the correlation coefficient 0.635 for K (d) and K (off), and indicated stable interfacial contacts in the formation of heterodimer. The coulombic interaction involving the C-terminal tails of the A(2A)R and intracellular loops (ICLs) of D2R led to the formation of interfacial contacts between A(2A)R-D2R. The properties of structural dynamics, ENM and KFC server-based hot-spot analysis illustrated the stoichiometry of A(2A)R-D2R contact interfaces as dimer. The propensity of amino acid residues involved in A(2A)R-D2R interaction revealed the presence of positively (R, H and K) and negatively (E and D) charged structural motif of TMs and ICL3 of A(2A)R and D2R at interface of dimer contact. Essentially, in silico structural and dynamic study of A(2A)R-D2R interactions will provide the basic understanding of the A(2A)R-D2R interfacial contact surface for activation and deactivation processes, and could be used as constructive model to recognize the protein-protein interactions in receptor assimilations.
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