4.4 Article

MAIN software for density averaging, model building, structure refinement and validation

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemical Research Methods

REFMAC5 for the refinement of macromolecular crystal structures

Garib N. Murshudov et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2011)

Article Biochemical Research Methods

Overview of the CCP4 suite and current developments

Martyn D. Winn et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2011)

Article Biochemical Research Methods

Experimental phasing with SHELXC/D/E: combining chain tracing with density modification

George M. Sheldrick

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)

Article Biochemical Research Methods

Features and development of Coot

P. Emsley et al.

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)

Article Biochemical Research Methods

PHENIX: a comprehensive Python-based system for macromolecular structure solution

Paul D. Adams et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2010)

Article Biochemical Research Methods

Pre-calculated protein structure alignments at the RCSB PDB website

Andreas Prlic et al.

BIOINFORMATICS (2010)

Article Biochemistry & Molecular Biology

Versatile Loops in Mycocypins Inhibit Three Protease Families

Miha Renko et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2010)

Article Biochemical Research Methods

Averaged kick maps: less noise, more signal...and probably less bias

Jure Praznikar et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2009)

Article Biochemical Research Methods

PURY: a database of geometric restraints of hetero compounds for refinement in complexes with macromolecular structures

Miha Andrejasic et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2008)

Article Biochemical Research Methods

Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7

Gerrit Langer et al.

NATURE PROTOCOLS (2008)

Article Chemistry, Multidisciplinary

Phaser crystallographic software

Airlie J. McCoy et al.

JOURNAL OF APPLIED CRYSTALLOGRAPHY (2007)

Article Biochemical Research Methods

Version 1.2 of the Crystallography and NMR system

Axel T. Brunger

NATURE PROTOCOLS (2007)

Article Biochemical Research Methods

The Buccaneer software for automated model building.: 1.: Tracing protein chains

Kevin Cowtan

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2006)

Article Biochemical Research Methods

HKL-3000:: the integration of data reduction and structure solution -: from diffraction images to an initial model in minutes

Wladek Minor et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2006)

Article Biochemistry & Molecular Biology

The NC1 dimer of human placental basement membrane collagen IV: does a covalent crosslink exist?

ME Than et al.

BIOLOGICAL CHEMISTRY (2005)

Article Biochemical Research Methods

Flexible structure alignment by chaining aligned fragment pairs allowing twists

Yuzhen Ye et al.

BIOINFORMATICS (2003)

Article Biochemical Research Methods

Flat bulk-solvent model: obtaining optimal parameters

A Fokine et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2002)

Article Chemistry, Multidisciplinary

The Cambridge Structural Database: a quarter of a million crystal structures and rising

FH Allen

ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE (2002)

Article Multidisciplinary Sciences

The 1.9-Å crystal structure of the noncollagenous (NC1) domain of human placenta collagen IV shows stabilization via a novel type of covalent Met-Lys cross-link

ME Than et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)

Article Chemistry, Multidisciplinary

Likelihood-based refinement. I. Irremovable model errors

VY Lunin et al.

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES (2002)

Article Biochemical Research Methods

STRAP:: editor for STRuctural Alignments of Proteins

C Gille et al.

BIOINFORMATICS (2001)

Article Biochemistry & Molecular Biology

Structure and mechanism of the aberrant ba3-cytochrome c oxidase from Thermus thermophilus

T Soulimane et al.

EMBO JOURNAL (2000)