4.4 Article

Use of knowledge-based restraints in phenix.refine to improve macromolecular refinement at low resolution

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemical Research Methods

REFMAC5 for the refinement of macromolecular crystal structures

Garib N. Murshudov et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2011)

Article Biochemical Research Methods

MolProbity: all-atom structure validation for macromolecular crystallography

Vincent B. Chen et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2010)

Article Biochemical Research Methods

Using a conformation-dependent stereochemical library improves crystallographic refinement of proteins

Dale E. Tronrud et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2010)

Article Biochemical Research Methods

Features and development of Coot

P. Emsley et al.

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)

Article Biochemical Research Methods

PHENIX: a comprehensive Python-based system for macromolecular structure solution

Paul D. Adams et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2010)

Software Review Chemistry, Multidisciplinary

ResDe: a new tool for visual definition of distance restraints for crystallographic refinement

Bradley J. Hintze et al.

JOURNAL OF APPLIED CRYSTALLOGRAPHY (2010)

Article Multidisciplinary Sciences

Super-resolution biomolecular crystallography with low-resolution data

Gunnar F. Schroeder et al.

NATURE (2010)

Article Biochemical Research Methods

Model-building strategies for low-resolution X-ray crystallographic data

Anjum M. Karmali et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2009)

Article Biochemistry & Molecular Biology

KiNG (Kinemage, Next Generation): A versatile interactive molecular and scientific visualization program

Vincent B. Chen et al.

PROTEIN SCIENCE (2009)

Article Chemistry, Multidisciplinary

A short history of SHELX

George M. Sheldrick

ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES (2008)

Article Biochemical Research Methods

Version 1.2 of the Crystallography and NMR system

Axel T. Brunger

NATURE PROTOCOLS (2007)

Article Multidisciplinary Sciences

Toward high-resolution de novo structure prediction for small proteins

P Bradley et al.

SCIENCE (2005)

Article Biochemical Research Methods

REFMAC5 dictionary:: organization of prior chemical knowledge and guidelines for its use

AA Vagin et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2004)

Article Chemistry, Multidisciplinary

UCSF chimera - A visualization system for exploratory research and analysis

EF Pettersen et al.

JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)

Letter Biochemistry & Molecular Biology

Announcing the worldwide Protein Data Bank

H Berman et al.

NATURE STRUCTURAL BIOLOGY (2003)

Article Biochemistry & Molecular Biology

Structure validation by Cα geometry:: φ,ψ and Cβ deviation

SC Lovell et al.

PROTEINS-STRUCTURE FUNCTION AND GENETICS (2003)

Article Biochemistry & Molecular Biology

An improved hydrogen bond potential: Impact on medium resolution protein structures

F Fabiola et al.

PROTEIN SCIENCE (2002)

Article Biochemistry & Molecular Biology

Geometric nomenclature and classification of RNA base pairs

NB Leontis et al.

Article Biochemical Research Methods

A number of real-space torsion-angle refinement techniques for proteins, nucleic acids, ligands and solvent

TJ Oldfield

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2001)

Article Biochemistry & Molecular Biology

Exploring steric constraints on protein mutations using MAGE/PROBE

JM Word et al.

PROTEIN SCIENCE (2000)