4.8 Article

Similarity of the dog and human gut microbiomes in gene content and response to diet

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Review Biochemistry & Molecular Biology

Mouse models for human intestinal microbiota research: a critical evaluation

Floor Hugenholtz et al.

CELLULAR AND MOLECULAR LIFE SCIENCES (2018)

Article Ecology

A family of interaction-adjusted indices of community similarity

Thomas Sebastian Benedikt Schmidt et al.

ISME JOURNAL (2017)

Article Microbiology

Stress and stability: applying the Anna Karenina principle to animal microbiomes

Jesse R. Zaneveld et al.

NATURE MICROBIOLOGY (2017)

Article Multidisciplinary Sciences

metaSNV: A tool for metagenomic strain level analysis

Paul Igor Costea et al.

PLOS ONE (2017)

Article Biochemical Research Methods

MOCAT2: a metagenomic assembly, annotation and profiling framework

Jens Roat Kultima et al.

BIOINFORMATICS (2016)

Article Multidisciplinary Sciences

Persistent microbiome alterations modulate the rate of post-dieting weight regain

Christoph A. Thaiss et al.

NATURE (2016)

Article Microbiology

A reference gene catalogue of the pig gut microbiome

Liang Xiao et al.

NATURE MICROBIOLOGY (2016)

Article Microbiology

Dog and human inflammatory bowel disease rely on overlapping yet distinct dysbiosis networks

Yoshiki Vazquez-Baeza et al.

NATURE MICROBIOLOGY (2016)

Article Agriculture, Dairy & Animal Science

Importance of gut microbiota for the health and disease of dogs and cats

Amanda B. Blake et al.

ANIMAL FRONTIERS (2016)

Article Biochemistry & Molecular Biology

Personalized Nutrition by Prediction of Glycemic Responses

David Zeevi et al.

Article Cell Biology

How informative is the mouse for human gut microbiota research?

Thi Loan Anh Nguyen et al.

DISEASE MODELS & MECHANISMS (2015)

Article Biotechnology & Applied Microbiology

A catalog of the mouse gut metagenome

Liang Xiao et al.

NATURE BIOTECHNOLOGY (2015)

Article Multidisciplinary Sciences

Structure and function of the global ocean microbiome

Shinichi Sunagawa et al.

SCIENCE (2015)

Article Biotechnology & Applied Microbiology

Inter-individual differences in the gene content of human gut bacterial species

Ana Zhu et al.

GENOME BIOLOGY (2015)

Article Biochemical Research Methods

Fast and sensitive protein alignment using DIAMOND

Benjamin Buchfink et al.

NATURE METHODS (2015)

Article Biochemistry & Molecular Biology

Potential of fecal microbiota for early-stage detection of colorectal cancer

Georg Zeller et al.

MOLECULAR SYSTEMS BIOLOGY (2014)

Article Multidisciplinary Sciences

Diet rapidly and reproducibly alters the human gut microbiome

Lawrence A. David et al.

NATURE (2014)

Article Biotechnology & Applied Microbiology

An integrated catalog of reference genes in the human gut microbiome

Junhua Li et al.

NATURE BIOTECHNOLOGY (2014)

Article Multidisciplinary Sciences

Genomic variation landscape of the human gut microbiome

Siegfried Schloissnig et al.

NATURE (2013)

Article Multidisciplinary Sciences

Richness of human gut microbiome correlates with metabolic markers

Emmanuelle Le Chatelier et al.

NATURE (2013)

Article Biochemical Research Methods

Metagenomic species profiling using universal phylogenetic marker genes

Shinichi Sunagawa et al.

NATURE METHODS (2013)

Article Biochemical Research Methods

Accurate and universal delineation of prokaryotic species

Daniel R. Mende et al.

NATURE METHODS (2013)

Review Nutrition & Dietetics

Use of pigs as a potential model for research into dietary modulation of the human gut microbiota

Sonja N. Heinritz et al.

NUTRITION RESEARCH REVIEWS (2013)

Article Multidisciplinary Sciences

The genomics of selection in dogs and the parallel evolution between dogs and humans

Guo-dong Wang et al.

NATURE COMMUNICATIONS (2013)

Article Biochemical Research Methods

CD-HIT: accelerated for clustering the next-generation sequencing data

Limin Fu et al.

BIOINFORMATICS (2012)

Article Multidisciplinary Sciences

MOCAT: A Metagenomics Assembly and Gene Prediction Toolkit

Jens Roat Kultima et al.

PLOS ONE (2012)

Article Biochemical Research Methods

Inferring Correlation Networks from Genomic Survey Data

Jonathan Friedman et al.

PLOS COMPUTATIONAL BIOLOGY (2012)

Article Microbiology

Abundance and short-term temporal variability of fecal microbiota in healthy dogs

Jose F. Garcia-Mazcorro et al.

MICROBIOLOGYOPEN (2012)

Editorial Material Biology

Large and linked in scientific publishing

Laurie Goodman et al.

GIGASCIENCE (2012)

Article Multidisciplinary Sciences

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

Gary D. Wu et al.

SCIENCE (2011)

Article Veterinary Sciences

An epidemiological study of environmental factors associated with canine obesity

E. A. Courcier et al.

JOURNAL OF SMALL ANIMAL PRACTICE (2010)

Article Endocrinology & Metabolism

Microbiota and SCFA in Lean and Overweight Healthy Subjects

Andreas Schwiertz et al.

OBESITY (2010)

Article Veterinary Sciences

A high protein high fibre diet improves weight loss in obese dogs

Alexander J. German et al.

VETERINARY JOURNAL (2010)

Article Gastroenterology & Hepatology

Low-carbohydrate, high-protein diets revisited

Robert F. Kushner et al.

CURRENT OPINION IN GASTROENTEROLOGY (2008)

Article Endocrinology & Metabolism

Human colonic microbiota associated with diet, obesity and weight loss

S. H. Duncan et al.

INTERNATIONAL JOURNAL OF OBESITY (2008)

Article Multidisciplinary Sciences

Evolution of mammals and their gut microbes

Ruth E. Ley et al.

SCIENCE (2008)

Article Multidisciplinary Sciences

The Human Microbiome Project

Peter J. Turnbaugh et al.

NATURE (2007)

Article Biochemistry & Molecular Biology

Phylogenomic data analyses provide evidence that Xenarthra and Afrotheria are sister groups

Bjoern M. Hallstroem et al.

MOLECULAR BIOLOGY AND EVOLUTION (2007)

Article Biochemistry & Molecular Biology

Using genomic data to unravel the root of the placental mammal phylogeny

William J. Murphy et al.

GENOME RESEARCH (2007)

Article Multidisciplinary Sciences

Microbial ecology - Human gut microbes associated with obesity

Ruth E. Ley et al.

NATURE (2006)

Article Multidisciplinary Sciences

An obesity-associated gut microbiome with increased capacity for energy harvest

Peter J. Turnbaugh et al.

NATURE (2006)

Article Biotechnology & Applied Microbiology

UniFrac: a new phylogenetic method for comparing microbial communities

C Lozupone et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)

Article Medicine, General & Internal

A randomized trial of a low-carbohydrate diet for obesity

GD Foster et al.

NEW ENGLAND JOURNAL OF MEDICINE (2003)

Article Medicine, General & Internal

A low-carbohydrate as compared with a low-fat diet in severe obesity

FF Samaha et al.

NEW ENGLAND JOURNAL OF MEDICINE (2003)