期刊
SOURCE CODE FOR BIOLOGY AND MEDICINE
卷 6, 期 1, 页码 -出版社
BIOMED CENTRAL LTD
DOI: 10.1186/1751-0473-6-7
关键词
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资金
- Google Summer of Code program
- US NIH via National Human Genome Research Institute (NHGRI) grant [P41 P41HG04118]
Background: When biological networks are studied, it is common to look for clusters, i.e. sets of nodes that are highly inter-connected. To understand the biological meaning of a cluster, the user usually has to sift through many textual annotations that are associated with biological entities. Findings: The WordCloud Cytoscape plugin generates a visual summary of these annotations by displaying them as a tag cloud, where more frequent words are displayed using a larger font size. Word co-occurrence in a phrase can be visualized by arranging words in clusters or as a network. Conclusions: WordCloud provides a concise visual summary of annotations which is helpful for network analysis and interpretation. WordCloud is freely available at http://baderlab.org/Software/WordCloudPlugin
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