4.6 Article

Comparative Genomic Analysis o f 130 Bacteriophages Infecting Bacteria in the Genus Pseudomonas

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Genetic Diversity and the Efficacy of Purifying Selection across Plant and Animal Species

Jun Chen et al.

MOLECULAR BIOLOGY AND EVOLUTION (2017)

Article Biochemistry & Molecular Biology

GenBank

Dennis A. Benson et al.

NUCLEIC ACIDS RESEARCH (2017)

Article Biochemistry & Molecular Biology

Enhanced annotations and features for comparing thousands of Pseudomonas genomes in the Pseudomonas genome database

Geoffrey L. Winsor et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Biochemistry & Molecular Biology

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

Sudhir Kumar et al.

MOLECULAR BIOLOGY AND EVOLUTION (2016)

Article Multidisciplinary Sciences

Uncovering Earth's virome

David Paez-Espino et al.

NATURE (2016)

Article Biochemistry & Molecular Biology

PHASTER: a better, faster version of the PHAST phage search tool

David Arndt et al.

NUCLEIC ACIDS RESEARCH (2016)

Review Microbiology

Computational approaches to predict bacteriophage-host relationships

Robert A. Edwards et al.

FEMS MICROBIOLOGY REVIEWS (2016)

Article Biochemistry & Molecular Biology

Comparative Genomic Analysis of Pseudomonas chlororaphis PCL1606 Reveals New Insight into Antifungal Compounds Involved in Biocontrol

Claudia E. Calderon et al.

MOLECULAR PLANT-MICROBE INTERACTIONS (2015)

Article Biotechnology & Applied Microbiology

Genomic comparison of 93 Bacillus phages reveals 12 clusters, 14 singletons and remarkable diversity

Julianne H. Grose et al.

BMC GENOMICS (2014)

Article Biochemistry & Molecular Biology

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)

Ross Overbeek et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Microbiology

Orthologous Gene Clusters and Taxon Signature Genes for Viruses of Prokaryotes

David M. Kristensen et al.

JOURNAL OF BACTERIOLOGY (2013)

Article Biochemistry & Molecular Biology

GenBank

Dennis A. Benson et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Biochemical Research Methods

Phamerator: a bioinformatic tool for comparative bacteriophage genomics

Steven G. Cresawn et al.

BMC BIOINFORMATICS (2011)

Review Infectious Diseases

Bacteriophages as vehicles of the resistome in cystic fibrosis

Jean Marc Rolain et al.

JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2011)

Article Biochemistry & Molecular Biology

PHAST: A Fast Phage Search Tool

You Zhou et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemistry & Molecular Biology

Comparative Genomic Analysis of 60 Mycobacteriophage Genomes: Genome Clustering, Gene Acquisition, and Gene Size

Graham F. Hatfull et al.

JOURNAL OF MOLECULAR BIOLOGY (2010)

Article Biochemistry & Molecular Biology

Ab initio gene identification in metagenomic sequences

Wenhan Zhu et al.

NUCLEIC ACIDS RESEARCH (2010)

Review Multidisciplinary Sciences

CRISPR/Cas, the Immune System of Bacteria and Archaea

Philippe Horvath et al.

SCIENCE (2010)

Review Virology

Mobile DNA elements in T4 and related phages

David R. Edgell et al.

VIROLOGY JOURNAL (2010)

Article Biochemical Research Methods

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

P. Librado et al.

BIOINFORMATICS (2009)

Article Biochemical Research Methods

BLAST plus : architecture and applications

Christiam Camacho et al.

BMC BIOINFORMATICS (2009)

Article Evolutionary Biology

Muller's Ratchet and compensatory mutation in Caenorhabditis briggsae mitochondrial genome evolution

Dana K. Howe et al.

BMC EVOLUTIONARY BIOLOGY (2008)

Article Biotechnology & Applied Microbiology

The RAST server: Rapid annotations using subsystems technology

Ramy K. Aziz et al.

BMC GENOMICS (2008)

Article Biochemical Research Methods

Gepard: a rapid and sensitive tool for creating dotplots on genome scale

Jan Krumsiek et al.

BIOINFORMATICS (2007)

Article Biochemistry & Molecular Biology

GenBank

Dennis A. Benson et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biology

Comparisons of dN/dS are time dependent for closely related bacterial genomes

EPC Rocha et al.

JOURNAL OF THEORETICAL BIOLOGY (2006)

Article Microbiology

Comparative genomic analysis of 18 Pseudomonas aeruginosa bacteriophages

T Kwan et al.

JOURNAL OF BACTERIOLOGY (2006)

Article Biochemical Research Methods

Kalign - an accurate and fast multiple sequence alignment algorithm

T Lassmann et al.

BMC BIOINFORMATICS (2005)

Article Biotechnology & Applied Microbiology

Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5

IT Paulsen et al.

NATURE BIOTECHNOLOGY (2005)

Article Multidisciplinary Sciences

The complete genomes and proteomes of 27 Staphylococcus aureus bacteriophages

T Kwan et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Biochemistry & Molecular Biology

ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences

D Laslett et al.

NUCLEIC ACIDS RESEARCH (2004)

Article Biotechnology & Applied Microbiology

Movement of viruses between biomes

E Sano et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)

Article Biochemistry & Molecular Biology

The Pseudomonas aerugonisa PAO1 gene collection

J LaBaer et al.

GENOME RESEARCH (2004)

Article Biochemistry & Molecular Biology

Improving gene annotation of complete viral genomes

R Mills et al.

NUCLEIC ACIDS RESEARCH (2003)

Review Microbiology

Imbroglios of viral taxonomy: Genetic exchange and failings of phenetic approaches

JG Lawrence et al.

JOURNAL OF BACTERIOLOGY (2002)