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Peter Johansson et al.
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Beryl Royer-Bertrand et al.
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Zuguang Gu et al.
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Ruli Gao et al.
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Marc J. Williams et al.
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Christina L. Decatur et al.
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Yukiko Komeno et al.
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The evolutionary history of lethal metastatic prostate cancer
Gunes Gundem et al.
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Analysis of the genetic phylogeny of multifocal prostate cancer identifies multiple independent clonal expansions in neoplastic and morphologically normal prostate tissue
Colin S. Cooper et al.
NATURE GENETICS (2015)
A Big Bang model of human colorectal tumor growth
Andrea Sottoriva et al.
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The Genetic Evolution of Melanoma from Precursor Lesions
A. Hunter Shain et al.
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J. Zachary Sanborn et al.
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Agnieszka K. Witkiewicz et al.
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Yuichi Shiraishi et al.
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Comparison and integration of deleteriousness prediction methods for nonsynonymous SNVs in whole exome sequencing studies
Chengliang Dong et al.
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ChAMP: 450k Chip Analysis Methylation Pipeline
Tiffany J. Morris et al.
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Modeling DNA methylation dynamics with approaches from phylogenetics
John A. Capra et al.
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CGAT: computational genomics analysis toolkit
David Sims et al.
BIOINFORMATICS (2014)
ABRA: improved coding indel detection via assembly-based realignment
Lisle E. Mose et al.
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TITAN: inference of copy number architectures, in clonal cell populations from tumor whole-genome sequence data
Gavin Ha et al.
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A day in the life of the spliceosome
A. Gregory Matera et al.
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Integrated RNA and DNA sequencing improves mutation detection in low purity tumors
Matthew D. Wilkerson et al.
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J. William Harbour et al.
OPHTHALMOLOGY (2014)
RADIA: RNA and DNA Integrated Analysis for Somatic Mutation Detection
Amie J. Radenbaugh et al.
PLOS ONE (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
Predicting the functional consequences of cancer-associated amino acid substitutions
Hashem A. Shihab et al.
BIOINFORMATICS (2013)
Signatures of mutational processes in human cancer
Ludmil B. Alexandrov et al.
NATURE (2013)
Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples
Kristian Cibulskis et al.
NATURE BIOTECHNOLOGY (2013)
Exome sequencing identifies recurrent somatic mutations in EIF1AX and SF3B1 in uveal melanoma with disomy 3
Marcel Martin et al.
NATURE GENETICS (2013)
Recurrent mutations at codon 625 of the splicing factor SF3B1 in uveal melanoma
J. William Harbour et al.
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Count-based differential expression analysis of RNA sequencing data using R and Bioconductor
Simon Anders et al.
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SF3B1 Mutations Are Associated with Alternative Splicing in Uveal Melanoma
Simon J. Furney et al.
CANCER DISCOVERY (2013)
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Marcin Imielinski et al.
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The Life History of 21 Breast Cancers
Serena Nik-Zainal et al.
CELL (2012)
VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
Daniel C. Koboldt et al.
GENOME RESEARCH (2012)
Dynamic Protein-Protein Interaction Wiring of the Human Spliceosome
Anna Hegele et al.
MOLECULAR CELL (2012)
Collaborative Ocular Oncology Group Report Number 1: Prospective Validation of a Multi-Gene Prognostic Assay in Uveal Melanoma
Michael D. Onken et al.
OPHTHALMOLOGY (2012)
The genetics of uveal melanoma: an emerging framework for targeted therapy
J. William Harbour
PIGMENT CELL & MELANOMA RESEARCH (2012)
Tumour evolution inferred by single-cell sequencing
Nicholas Navin et al.
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Frequent pathway mutations of splicing machinery in myelodysplasia
Kenichi Yoshida et al.
NATURE (2011)
Germline mutations in BAP1 predispose to melanocytic tumors
Thomas Wiesner et al.
NATURE GENETICS (2011)
A method and server for predicting damaging missense mutations
Ivan A. Adzhubei et al.
NATURE METHODS (2010)
Mutations in GNA11 in Uveal Melanoma.
Catherine D. Van Raamsdonk et al.
NEW ENGLAND JOURNAL OF MEDICINE (2010)
ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
Kai Wang et al.
NUCLEIC ACIDS RESEARCH (2010)
Allele-specific copy number analysis of tumors
Peter Van Loo et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Frequent Mutation of BAP1 in Metastasizing Uveal Melanomas
J. William Harbour et al.
SCIENCE (2010)
Oncogenic GNAQ mutations are not correlated with disease-free survival in uveal melanoma
J. Bauer et al.
BRITISH JOURNAL OF CANCER (2009)
Frequent somatic mutations of GNAQ in uveal melanoma and blue naevi
Catherine D. Van Raamsdonk et al.
NATURE (2009)
Genomic Profiling and Identification of High-Risk Uveal Melanoma by Array CGH Analysis of Primary Tumors and Liver Metastases
Julien Trolet et al.
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Oncogenic Mutations in GNAQ Occur Early in Uveal Melanoma
Michael D. Onken et al.
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APE: Analyses of Phylogenetics and Evolution in R language
E Paradis et al.
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Dissecting karyotypic patterns in malignant melanomas: Temporal clustering of losses and gains in melanoma karyotypic evolution
M Hoglund et al.
INTERNATIONAL JOURNAL OF CANCER (2004)
Gene expression profiling in uveal melanoma reveals two molecular classes and predicts metastatic death
MD Onken et al.
CANCER RESEARCH (2004)
Survival rates with uveal melanoma in the United States: 1973-1997
AD Singh et al.
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Fast and accurate phylogeny reconstruction algorithms based on the minimum-evolution principle
R Desper et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2002)
Possible cause of G•C → C•G transversion mutation by guanine oxidation product, imidazolone
K Kino et al.
CHEMISTRY & BIOLOGY (2001)
Tumor doubling times in metastatic malignant melanoma of the uvea -: Tumor progression before and after treatment
S Eskelin et al.
OPHTHALMOLOGY (2000)
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