4.4 Article

tRNA fragments (tRFs) guide Ago to regulate gene expression post-transcriptionally in a Dicer-independent manner

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Plant Sciences

tRex: A Web Portal for Exploration of tRNA-Derived Fragments in Arabidopsis thaliana

Agnieszka Thompson et al.

PLANT AND CELL PHYSIOLOGY (2018)

Article Biochemistry & Molecular Biology

LTR-Retrotransposon Control by tRNA-Derived Small RNAs

Andrea J. Schorn et al.

Article Biotechnology & Applied Microbiology

Near-optimal probabilistic RNA-seq quantification

Nicolas L. Bray et al.

NATURE BIOTECHNOLOGY (2016)

Article Biochemical Research Methods

Selective amplification and sequencing of cyclic phosphate-containing RNAs by the cP-RNA-seq method

Shozo Honda et al.

NATURE PROTOCOLS (2016)

Article Biochemistry & Molecular Biology

tRF2Cancer: A web server to detect tRNA-derived small RNA fragments (tRFs) and their expression in multiple cancers

Ling-Ling Zheng et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Multidisciplinary Sciences

Re-evaluation of the roles of DROSHA, Exportin 5, and DICER in microRNA biogenesis

Young-Kook Kim et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Review Biochemistry & Molecular Biology

Biogenesis and Function of Transfer RNA-Related Fragments (tRFs)

Pankaj Kumar et al.

TRENDS IN BIOCHEMICAL SCIENCES (2016)

Article Multidisciplinary Sciences

Argonaute-associated short introns are a novel class of gene regulators

Thomas B. Hansen et al.

NATURE COMMUNICATIONS (2016)

Review Biochemistry & Molecular Biology

Why should cancer biologists care about tRNAs? tRNA synthesis, mRNA translation and the control of growth

Savraj S. Grewal

BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2015)

Review Biochemistry & Molecular Biology

The Many Virtues of tRNA-derived Stress-induced RNAs (tiRNAs): Discovering Novel Mechanisms of Stress Response and Effect on Human Health

Mridusmita Saikia et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2015)

Article Biochemical Research Methods

Efficient and quantitative high-throughput tRNA sequencing

Guanqun Zheng et al.

NATURE METHODS (2015)

Review Genetics & Heredity

NON-CODING RNA Towards a molecular understanding of microRNA-mediated gene silencing

Stefanie Jonas et al.

NATURE REVIEWS GENETICS (2015)

Article Biochemistry & Molecular Biology

tRFdb: a database for transfer RNA fragments

Pankaj Kumar et al.

NUCLEIC ACIDS RESEARCH (2015)

Article Biochemistry & Molecular Biology

Global Analyses of the Effect of Different Cellular Contexts on MicroRNA Targeting

Jin-Wu Nam et al.

MOLECULAR CELL (2014)

Article Biochemistry & Molecular Biology

Derivation and characterization of Dicer- and microRNA-deficient human cells

Hal P. Bogerd et al.

Review Oncology

DICER1: mutations, microRNAs and mechanisms

William D. Foulkes et al.

NATURE REVIEWS CANCER (2014)

Article Biotechnology & Applied Microbiology

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love et al.

GENOME BIOLOGY (2014)

Article Biochemistry & Molecular Biology

Mapping the Human miRNA Interactome by CLASH Reveals Frequent Noncanonical Binding

Aleksandra Helwak et al.

Review Genetics & Heredity

Argonaute proteins: functional insights and emerging roles

Gunter Meister

NATURE REVIEWS GENETICS (2013)

Article Multidisciplinary Sciences

tRNA-derived microRNA modulates proliferation and the DNA damage response and is down-regulated in B cell lymphoma

Roy L. Maute et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Biochemistry & Molecular Biology

Transcriptional Amplification in Tumor Cells with Elevated c-Myc

Charles Y. Lin et al.

Article Biochemistry & Molecular Biology

Dicer is dispensable for asymmetric RISC loading in mammals

Juan G. Betancur et al.

Article Multidisciplinary Sciences

A Dicer-independent miRNA biogenesis pathway that requires Ago catalysis

Sihem Cheloufi et al.

NATURE (2010)

Editorial Material Biochemistry & Molecular Biology

A miRNA-tRNA mix-up tRNA origin of proposed miRNA

Nick C. T. Schopman et al.

RNA BIOLOGY (2010)

Article Biochemistry & Molecular Biology

Human tRNA-derived small RNAs in the global regulation of RNA silencing

Dirk Haussecker et al.

Article Cell Biology

A novel class of small RNAs: tRNA-derived RNA fragments (tRFs)

Yong Sun Lee et al.

GENES & DEVELOPMENT (2009)

Article Biochemistry & Molecular Biology

tRNA over-expression in breast cancer and functional consequences

Mariana Pavon-Eternod et al.

NUCLEIC ACIDS RESEARCH (2009)

Review Genetics & Heredity

Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?

Witold Filipowicz et al.

NATURE REVIEWS GENETICS (2008)

Article Biochemistry & Molecular Biology

GW182 interaction with Argonaute is essential for miRNA-mediated translational repression and mRNA decay

Ana Eulalio et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2008)

Article Biochemistry & Molecular Biology

Determinants of targeting by endogenous and exogenous microRNAs and siRNAs

Cydney B. Nielsen et al.

Article Biochemistry & Molecular Biology

MicroRNA targeting specificity in mammals: Determinants beyond seed pairing

Andrew Grimson et al.

MOLECULAR CELL (2007)

Review Biochemistry & Molecular Biology

A story with a good ending:: tRNA 3′-end maturation by CCA-adding enzymes

Y Xiong et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2006)

Article Biochemistry & Molecular Biology

Human RISC couples microRNA biogenesis and posttranscriptional gene silencing

RI Gregory et al.

Article Multidisciplinary Sciences

TRBP recruits the Dicer complex to Ago2 for microRNA processing and gene silencing

TP Chendrimada et al.

NATURE (2005)

Article Biochemistry & Molecular Biology

Principles of MicroRNA-target recognition

J Brennecke et al.

PLOS BIOLOGY (2005)

Article Multidisciplinary Sciences

Direct activation of RNA polymerase III transcription by c-Myc

N Gomez-Roman et al.

NATURE (2003)

Article Multidisciplinary Sciences

Role for a bidentate ribonuclease in the initiation step of RNA interference

E Bernstein et al.

NATURE (2001)