相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。SVMQA: support-vector-machine-based protein single-model quality assessment
Balachandran Manavalan et al.
BIOINFORMATICS (2017)
Template-free modeling by LEE and LEER in CASP11
Insuk Joung et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2016)
Template based protein structure modeling by global optimization in CASP11
Keehyoung Joo et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2016)
FoXS, FoXSDock and MultiFoXS: Single-state and multi-state structural modeling of proteins and their complexes based on SAXS profiles
Dina Schneidman-Duhovny et al.
NUCLEIC ACIDS RESEARCH (2016)
DockQ: A Quality Measure for Protein-Protein Docking Models
Sankar Basu et al.
PLOS ONE (2016)
Contact-assisted protein structure modeling by global optimization in CASP11
Keehyoung Joo et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2016)
MetaPSICOV: combining coevolution methods for accurate prediction of contacts and long range hydrogen bonding in proteins
David T. Jones et al.
BIOINFORMATICS (2015)
Uncertainty in integrative structural modeling
Dina Schneidman-Duhovny et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2014)
Protein structure modeling for CASP10 by multiple layers of global optimization
Keehyoung Joo et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2014)
Accurate SAXS Profile Computation and its Assessment by Contrast Variation Experiments
Dina Schneidman-Duhovny et al.
BIOPHYSICAL JOURNAL (2013)
Putting the Pieces Together: Integrative Modeling Platform Software for Structure Determination of Macromolecular Assemblies
Daniel Russel et al.
PLOS BIOLOGY (2012)
GOAP: A Generalized Orientation-Dependent, All-Atom Statistical Potential for Protein Structure Prediction
Hongyi Zhou et al.
BIOPHYSICAL JOURNAL (2011)
De novo protein structure prediction by dynamic fragment assembly and conformational space annealing
Juyong Lee et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2011)
Bridging the solution divide: comprehensive structural analyses of dynamic RNA, DNA, and protein assemblies by small-angle X-ray scattering
Robert P. Rambo et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2010)
Structural characterization of proteins and complexes using small-angle X-ray solution scattering
Haydyn D. T. Mertens et al.
JOURNAL OF STRUCTURAL BIOLOGY (2010)
Probing Native Protein Structures by Chemical Cross-linking, Mass Spectrometry, and Bioinformatics
Alexander Leitner et al.
MOLECULAR & CELLULAR PROTEOMICS (2010)
Robust, high-throughput solution structural analyses by small angle X-ray scattering (SAXS)
Greg L. Hura et al.
NATURE METHODS (2009)
Improving physical realism, stereochemistry, and side-chain accuracy in homology modeling: Four approaches that performed well in CASP8
Elmar Krieger et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2009)
High accuracy template based modeling by global optimization
Keehyoung Joo et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2007)
Scoring function for automated assessment of protein structure template quality
Y Zhang et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2004)
Chemical cross-linking and mass spectrometry for protein structural modeling
JW Back et al.
JOURNAL OF MOLECULAR BIOLOGY (2003)
ZDOCK: An initial-stage protein-docking algorithm
R Chen et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2003)
An orientation-dependent hydrogen bonding potential improves prediction of specificity and structure for proteins and protein-protein complexes
T Kortemme et al.
JOURNAL OF MOLECULAR BIOLOGY (2003)
Distance-scaled, finite ideal-gas reference state improves structure-derived potentials of mean force for structure selection and stability prediction
HY Zhou et al.
PROTEIN SCIENCE (2002)